RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 RAPGEF1Q13905 1077 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 PTPN21Q16825 1174 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 UVSSAQ2YD98 709 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 MDH1BQ5I0G3 518 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 ELMSAN1Q6PJG2 1045 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 SARM1Q6SZW1 724 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 TMEM270Q6UE05 265 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 SPATA31D4Q6ZUB0 917 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 SPATA2LQ8IUW3 424 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 CRYBG2Q8N1P7 616 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 KREMEN2Q8NCW0 462 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 MYCBPAPQ8TBZ2 947 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 PKMYT1Q99640 499 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 GANQ9H2C0 597 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 TMLHEQ9NVH6 421 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 FBXW11Q9UKB1 542 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 MAFFQ9ULX9 164 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 DAAM1Q9Y4D1 1078 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 PCDHB5Q9Y5E4 795 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 FHOD1Q9Y613 1164 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 ATG2AQ2TAZ0 1938 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 MTMR11A4FU01 709 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 PRRG1O14668 218 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 LINC01565O15544 149 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 CDR1P51861 262 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 RAD23BP54727 409 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 POLR2FP61218 127 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 ADAM15Q13444 863 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 KCNC3Q14003 757 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 DRAP1Q14919 205 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 SKIV2LQ15477 1246 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 CCDC142Q17RM4 750 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 LIN9Q5TKA1 542 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 SMYD5Q6GMV2 418 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 C4orf50Q6ZRC1 276 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 ATAD1Q8NBU5 361 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 RBBP8NLQ8NC74 664 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 VN1R2Q8NFZ6 395 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 SPPL2BQ8TCT7 592 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 SHC3Q92529 594 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 MYLPFQ96A32 169 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 TMEM176AQ96HP8 235 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 HEXIM2Q96MH2 286 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 LPIN3Q9BQK8 851 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 NAA15Q9BXJ9 866 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 CYP4F11Q9HBI6 524 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 ABI2Q9NYB9 513 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-205ENST00000428174 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 FOXN3O00409 490 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 EPHB6O15197 1021 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 SEC24AO95486 1093 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 VNN2O95498 520 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 CD19P15391 556 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 PBX1P40424 430 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 USP8P40818 1118 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 CYP27A1Q02318 531 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 DUSP4Q13115 394 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 TMEM184AQ6ZMB5 413 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 TCEAL8Q8IYN2 117 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 C12orf29Q8N999 325 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 FUBP3Q96I24 572 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 MED10Q9BTT4 135 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 STK33Q9BYT3 514 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 TRIM5Q9C035 493 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 DZANK1Q9NVP4 752 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
CCHCR1-205ENST00000428174 ATP8B3O60423 1300 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 RNF225M0QZC1 329 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 CLDN5O00501 218 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 AP5Z1O43299 807 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 ZMYND10O75800 440 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 GLP2RO95838 553 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 C8AP07357 584 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 PAEPP09466 180 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 HAPLN1P10915 354 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 VDRP11473 427 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 CCDC130P13994 396 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 TUFMP49411 452 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 ZNF132P52740 706 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 COL19A1Q14993 1142 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 CTC1Q2NKJ3 1217 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 MGAT5BQ3V5L5 792 aa13.67□□□□□ -0.22
CCHCR1-205ENST00000428174 RTL10Q7L3V2 364 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms