RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 GCNT3O95395 438 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 ITGB3P05106 788 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 PDCP20941 246 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 GARTP22102 1010 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 CDC25CP30307 473 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 CXCL12P48061 93 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 NLRP12P59046 1061 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 TFAMQ00059 246 aaKnown RBP10.82□□□□□ -0.68
GACAT3-201ENST00000426539 SMARCB1Q12824 385 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 SRSF5Q13243 272 aaKnown RBP10.82□□□□□ -0.68
GACAT3-201ENST00000426539 PUM1Q14671 1186 aaKnown RBP eCLIP10.82□□□□□ -0.68
GACAT3-201ENST00000426539 VEPH1Q14D04 833 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 SLC39A14Q15043 492 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 PON2Q15165 354 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 LPAL2Q16609 132 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 SV2CQ496J9 727 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 ARHGAP29Q52LW3 1261 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 SDHAF4Q5VUM1 108 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 OSTM1Q86WC4 334 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 RALGPS2Q86X27 583 aaPredicted RBP10.82□□□□□ -0.68
GACAT3-201ENST00000426539 CMTM8Q8IZV2 173 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 SPEM1Q8N4L4 309 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 GLIS3Q8NEA6 775 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 TMC2Q8TDI7 906 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 ZNF560Q96MR9 790 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 FAM83CQ9BQN1 747 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 PI4K2AQ9BTU6 479 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 RBAKQ9NYW8 714 aaPredicted RBP10.82□□□□□ -0.68
GACAT3-201ENST00000426539 SIX4Q9UIU6 781 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 AGAP1Q9UPQ3 857 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 EXOC7Q9UPT5 735 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 CCL26Q9Y258 94 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 PCDHB5Q9Y5E4 795 aa10.82□□□□□ -0.68
GACAT3-201ENST00000426539 CACNA1AO00555 2505 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 OTOL1A6NHN0 477 aaPredicted RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 CHURC1-FNTBB4DL54 471 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 TADA3O75528 432 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PRPF6O94906 941 aaKnown RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PAPSS2O95340 614 aaPredicted RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 IDEP14735 1019 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 ACAT1P24752 427 aaKnown RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PNPLA4P41247 253 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 FNTBP49356 437 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 NRLP54845 237 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 CCINQ13939 588 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 LRRC32Q14392 662 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 TXNDC8Q6A555 127 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PKN3Q6P5Z2 889 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 C1orf228Q6PIY5 440 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 CCDC73Q6ZRK6 1079 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 DCP1BQ8IZD4 617 aaKnown RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 CELF5Q8N6W0 485 aaKnown RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 LRRC52Q8N7C0 313 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 LEO1Q8WVC0 666 aaPredicted RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 USP13Q92995 863 aaPredicted RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 HPS3Q969F9 1004 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PCIF1Q9H4Z3 704 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PDE11AQ9HCR9 933 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 HPS4Q9NQG7 708 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 GKN1Q9NS71 199 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PANK4Q9NVE7 773 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 DDX43Q9NXZ2 648 aaKnown RBP10.81□□□□□ -0.68
GACAT3-201ENST00000426539 PTPRJQ12913 1337 aa10.81□□□□□ -0.68
GACAT3-201ENST00000426539 DMXL1Q9Y485 3027 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 TULP1O00294 542 aaPredicted RBP10.8□□□□□ -0.68
GACAT3-201ENST00000426539 GABRDO14764 452 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 EXTL3O43909 919 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 PRPF40AO75400 957 aaKnown RBP10.8□□□□□ -0.68
GACAT3-201ENST00000426539 CYP2F1P24903 491 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 HOXD13P35453 343 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 TXLNAP40222 546 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 STAT6P42226 847 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 NASPP49321 788 aaPredicted RBP10.8□□□□□ -0.68
GACAT3-201ENST00000426539 ATXN1P54253 815 aaKnown RBP10.8□□□□□ -0.68
GACAT3-201ENST00000426539 BFSP1Q12934 665 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 E2F4Q16254 413 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 DDR2Q16832 855 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 SOWAHAQ2M3V2 549 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 ITPRIPL2Q3MIP1 535 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 DGKKQ5KSL6 1271 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 LMBRD2Q68DH5 695 aaPredicted RBP10.8□□□□□ -0.68
GACAT3-201ENST00000426539 TRIM68Q6AZZ1 485 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 LIMS2Q7Z4I7 341 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 SYCP3Q8IZU3 236 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 GPR161Q8N6U8 529 aaKnown RBP10.8□□□□□ -0.68
GACAT3-201ENST00000426539 PDILTQ8N807 584 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 MAB21L3Q8N8X9 362 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 OR5B17Q8NGF7 314 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 INTS4Q96HW7 963 aaKnown RBP10.8□□□□□ -0.68
GACAT3-201ENST00000426539 GCNAQ96QF7 691 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 ACBD6Q9BR61 282 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 MTMR12Q9C0I1 747 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 GDAP2Q9NXN4 497 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 GTF3C4Q9UKN8 822 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 ITGA11Q9UKX5 1188 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 CEP250Q9BV73 2442 aa10.8□□□□□ -0.68
GACAT3-201ENST00000426539 HUS1O60921 280 aa10.79□□□□□ -0.68
GACAT3-201ENST00000426539 NOL4O94818 638 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms