RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 TRIM49P0CI25 452 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 TRIM49CP0CI26 452 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 EEF1GP26641 437 aaKnown RBP9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 KLRC2P26717 231 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 NOP14P78316 857 aaKnown RBP9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 TSPY1Q01534 308 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 TYRO3Q06418 890 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 RAB33AQ14088 237 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 SGSM1Q2NKQ1 1148 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 CTXN3Q4LDR2 81 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 LIN9Q5TKA1 542 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 SV2AQ7L0J3 742 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 LIMS2Q7Z4I7 341 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 ADGRF2Q8IZF7 708 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 THEM5Q8N1Q8 247 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 CMASQ8NFW8 434 aaPredicted RBP9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 FAM81BQ96LP2 452 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 XYLT2Q9H1B5 865 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 ZDHHC7Q9NXF8 308 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 CLDND1Q9NY35 253 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 COQ4Q9Y3A0 265 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 SNX9Q9Y5X1 595 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 CDY1Q9Y6F8 540 aa9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 ZNF638Q14966 1978 aaKnown RBP9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 HELZP42694 1942 aaKnown RBP9.6□□□□□ -0.87
TPM3P4-201ENST00000425942 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 C2CD2LO14523 706 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 TBX10O75333 385 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 CLSTN1O94985 981 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 HLA-DRAP01903 254 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 AFPP02771 609 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 TPM2P07951 284 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 HNRNPA1P09651 372 aaKnown RBP eCLIP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 CPB1P15086 417 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 WARSP23381 471 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 TBXAS1P24557 533 aaPredicted RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 FMO5P49326 533 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 STX17P56962 302 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 YWHAEP62258 255 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 DLG4P78352 724 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 ROR1Q01973 937 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 ITIH3Q06033 890 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 PLD1Q13393 1074 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 ADAM15Q13444 863 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 SMAD4Q13485 552 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 MAPRE1Q15691 268 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 NFE2Q16621 373 aaPredicted RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 MAN2A1Q16706 1144 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 UVSSAQ2YD98 709 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 C1orf220Q5T0J3 134 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 CCDC149Q6ZUS6 474 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 DCP1BQ8IZD4 617 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 PDCL2Q8N4E4 241 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 SMRP1Q8NCR6 262 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 ANKRD20A12PQ8NF67 263 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 SPPL2BQ8TCT7 592 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 SLC22A17Q8WUG5 538 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 ATXN2LQ8WWM7 1075 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 AUTS2Q8WXX7 1259 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 RABGGTAQ92696 567 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 FUBP3Q96I24 572 aaKnown RBP eCLIP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 NECTIN4Q96NY8 510 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 CLSTN3Q9BQT9 956 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 ACBD6Q9BR61 282 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 SRRTQ9BXP5 876 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 NIF3L1Q9GZT8 377 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 MAN1C1Q9NR34 630 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 AFF4Q9UHB7 1163 aaKnown RBP9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 FBXL5Q9UKA1 691 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 L1RE1Q9UN81 338 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 DAAM1Q9Y4D1 1078 aa9.59□□□□□ -0.87
TPM3P4-201ENST00000425942 I3L4J1 428 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 GABRDO14764 452 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 TGM5O43548 720 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 CSPG5O95196 566 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 VNN1O95497 513 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 ATF2P15336 505 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 RFX1P22670 979 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 GCLMP48507 274 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 PPP3CAQ08209 521 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 INCA1Q0VD86 236 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 GPR17Q13304 367 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 WDR72Q3MJ13 1102 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 LEXMQ3ZCV2 418 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 WDR44Q5JSH3 913 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 ANKRD54Q6NXT1 300 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 LILRA6Q6PI73 481 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 PRSS55Q6UWB4 352 aaPredicted RBP9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 TAS1R1Q7RTX1 841 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 UNC93AQ86WB7 457 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 ZNF461Q8TAF7 563 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 FOXJ1Q92949 421 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 EEF2KMTQ96G04 330 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 MSLNLQ96KJ4 702 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 B3GALT6Q96L58 329 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 CEP295NLQ96MC4 621 aa9.58□□□□□ -0.88
TPM3P4-201ENST00000425942 POP1Q99575 1024 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms