RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 INTS13Q9NVM9 706 aa17.39■□□□□ 0.37
DDR1-234ENST00000424544 ITGA11Q9UKX5 1188 aa17.39■□□□□ 0.37
DDR1-234ENST00000424544 L1RE1Q9UN81 338 aa17.39■□□□□ 0.37
DDR1-234ENST00000424544 TGFB1I1O43294 461 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 RBP5P82980 135 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 NFE2Q16621 373 aaPredicted RBP17.38■□□□□ 0.37
DDR1-234ENST00000424544 MGAT5BQ3V5L5 792 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 WDR44Q5JSH3 913 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 GPR158Q5T848 1215 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 OSTM1Q86WC4 334 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 GPIHBP1Q8IV16 184 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 TMEM86AQ8N2M4 240 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 CSGALNACT2Q8N6G5 542 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 MSANTD3Q96H12 275 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 SEPT5Q99719 369 aaPredicted RBP17.38■□□□□ 0.37
DDR1-234ENST00000424544 IER2Q9BTL4 223 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 SLITRK6Q9H5Y7 841 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 LMAN1LQ9HAT1 526 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 ZMYM5Q9UJ78 669 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 HPSEQ9Y251 543 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 PCDHGA2Q9Y5H1 932 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 PIAS3Q9Y6X2 628 aa17.38■□□□□ 0.37
DDR1-234ENST00000424544 TICRRQ7Z2Z1 1910 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 MYBPHLA2RUH7 354 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 PFKFB1P16118 471 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 CDC25CP30307 473 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 CDR1P51861 262 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 NLRP12P59046 1061 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 AMPD3Q01432 767 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 CSTF1Q05048 431 aaKnown RBP17.37■□□□□ 0.37
DDR1-234ENST00000424544 GAS6Q14393 721 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 SOWAHAQ2M3V2 549 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 FAM171BQ6P995 826 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 DPH6Q7L8W6 267 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 TOP6BLQ8N6T0 577 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 GIPC2Q8TF65 315 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 MYRFLQ96LU7 910 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 C8orf33Q9H7E9 229 aaPredicted RBP17.37■□□□□ 0.37
DDR1-234ENST00000424544 ABCB6Q9NP58 842 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 ZSCAN32Q9NX65 697 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 PCDHB5Q9Y5E4 795 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 PTPRJQ12913 1337 aa17.37■□□□□ 0.37
DDR1-234ENST00000424544 ZNF233A6NK53 670 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 EIF3DO15371 548 aaKnown RBP eCLIP17.36■□□□□ 0.37
DDR1-234ENST00000424544 HUS1O60921 280 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 PRAMEF12O95522 483 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 CCNE1P24864 410 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 SYKP43405 635 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 NDUFA8P51970 172 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 TSPY1Q01534 308 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 ARHGAP29Q52LW3 1261 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 INTS6LQ5JSJ4 861 aaKnown RBP17.36■□□□□ 0.37
DDR1-234ENST00000424544 C1orf228Q6PIY5 440 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 CBWD2Q8IUF1 395 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 OR5B17Q8NGF7 314 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 FAM126AQ9BYI3 521 aaPredicted RBP17.36■□□□□ 0.37
DDR1-234ENST00000424544 MTMR12Q9C0I1 747 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 GOLPH3LQ9H4A5 285 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 DDX43Q9NXZ2 648 aaKnown RBP17.36■□□□□ 0.37
DDR1-234ENST00000424544 HSPBP1Q9NZL4 362 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 NDRG2Q9UN36 371 aaKnown RBP17.36■□□□□ 0.37
DDR1-234ENST00000424544 DENND4CQ5VZ89 1909 aa17.36■□□□□ 0.37
DDR1-234ENST00000424544 CEP250Q9BV73 2442 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 POLR2DO15514 142 aaKnown RBP17.35■□□□□ 0.37
DDR1-234ENST00000424544 KINO60870 393 aaKnown RBP17.35■□□□□ 0.37
DDR1-234ENST00000424544 LHX1P48742 406 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 SNRPFP62306 86 aaKnown RBP17.35■□□□□ 0.37
DDR1-234ENST00000424544 CYP4F8P98187 520 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 FAM160A1Q05DH4 1040 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 VEPH1Q14D04 833 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 SURF1Q15526 300 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 DUOXA2Q1HG44 320 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 CFAP221Q4G0U5 840 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 ARHGAP15Q53QZ3 475 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 TXNDC11Q6PKC3 985 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 TSSK4Q6SA08 328 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 STXBP4Q6ZWJ1 553 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 RALGPS2Q86X27 583 aaPredicted RBP17.35■□□□□ 0.37
DDR1-234ENST00000424544 YAF2Q8IY57 180 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 CMTM8Q8IZV2 173 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 ENGASEQ8NFI3 743 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 FAM200AQ8TCP9 573 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 RUBCNQ92622 972 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 DHX58Q96C10 678 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 FAM83CQ9BQN1 747 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 PI4K2AQ9BTU6 479 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
DDR1-234ENST00000424544 KIAA1586Q9HCI6 787 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 ABI2Q9NYB9 513 aaPredicted RBP17.35■□□□□ 0.37
DDR1-234ENST00000424544 GTSE1Q9NYZ3 720 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 GTF3C4Q9UKN8 822 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 SNX9Q9Y5X1 595 aa17.35■□□□□ 0.37
DDR1-234ENST00000424544 NUP210Q8TEM1 1887 aaPredicted RBP17.35■□□□□ 0.37
DDR1-234ENST00000424544 CACNA1AO00555 2505 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 HCRTO43612 131 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 NOL4O94818 638 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 ZNF202O95125 648 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms