RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ZP2Q05996 745 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 MAPRE1Q15691 268 aaKnown RBP19.71■□□□□ 0.75
HDAC6-205ENST00000423941 TPD52L1Q16890 204 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-205ENST00000423941 CCDC142Q17RM4 750 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 WDR44Q5JSH3 913 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 CCDC150Q8NCX0 1101 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 EHBP1Q8NDI1 1231 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 MYCBPAPQ8TBZ2 947 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 WHAMMQ8TF30 809 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 BPIFA3Q9BQP9 254 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 DNAJC25Q9H1X3 360 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 CEP72Q9P209 647 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 DNMT3BQ9UBC3 853 aaKnown RBP19.71■□□□□ 0.75
HDAC6-205ENST00000423941 SLC27A5Q9Y2P5 690 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 YIPF1Q9Y548 306 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 PCDHB5Q9Y5E4 795 aa19.71■□□□□ 0.75
HDAC6-205ENST00000423941 GTPBP10A4D1E9 387 aaKnown RBP19.7■□□□□ 0.74
HDAC6-205ENST00000423941 A8MXQ7 604 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 LOC730098B7Z3J9 87 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 CCL16O15467 120 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 XYLBO75191 536 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 MAGEA11P43364 429 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 EPHA5P54756 1037 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 MAN2A1Q16706 1144 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 TCP11X2Q5H9J9 407 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 MIIPQ5JXC2 388 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 HSD3B7Q9H2F3 369 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 DPEP3Q9H4B8 488 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 USTQ9Y2C2 406 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 DOCK8Q8NF50 2099 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 GREB1Q4ZG55 1949 aa19.7■□□□□ 0.74
HDAC6-205ENST00000423941 LRRC10BA6NIK2 292 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 SPDYE4A6NLX3 237 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 CILPO75339 1184 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 LRG1P02750 347 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 PRKCSHP14314 528 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-205ENST00000423941 EEF1GP26641 437 aaKnown RBP19.69■□□□□ 0.74
HDAC6-205ENST00000423941 NDST1P52848 882 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 PSMC1P62191 440 aaKnown RBP19.69■□□□□ 0.74
HDAC6-205ENST00000423941 MYL5Q02045 173 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 TWF1Q12792 350 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 NFKBIBQ15653 356 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 SCARA5Q6ZMJ2 495 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 TTC39CQ8N584 583 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 UBR7Q8N806 425 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 B3GALNT2Q8NCR0 500 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 ADAMTS19Q8TE59 1207 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 PCED1BQ96HM7 432 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 TUBGCP2Q9BSJ2 902 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 LRRC3Q9BY71 257 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.69■□□□□ 0.74
HDAC6-205ENST00000423941 FANCLQ9NW38 375 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 ASB3Q9Y575 518 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 VCANP13611 3396 aa19.69■□□□□ 0.74
HDAC6-205ENST00000423941 KCNJ18B7U540 433 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 ZNF18P17022 549 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 PTPN2P17706 415 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 ATF6P18850 670 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 CETN1Q12798 172 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 PLD1Q13393 1074 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 KCNJ12Q14500 433 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 ANO6Q4KMQ2 910 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 C4orf50Q6ZRC1 276 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 PAQR9Q6ZVX9 377 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 GRASPQ7Z6J2 395 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-205ENST00000423941 TNIP3Q96KP6 325 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 ARID3AQ99856 593 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 LPIN3Q9BQK8 851 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 PIDD1Q9HB75 910 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 HCFC1R1Q9NWW0 138 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 ABI2Q9NYB9 513 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-205ENST00000423941 HMGXB4Q9UGU5 601 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 CLUHO75153 1309 aa19.68■□□□□ 0.74
HDAC6-205ENST00000423941 CYP2F1P24903 491 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 MTIF2P46199 727 aaKnown RBP19.67■□□□□ 0.74
HDAC6-205ENST00000423941 ALDH1A3P47895 512 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 CUL2Q13617 745 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 VWA3BQ502W6 1294 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 VSTM1Q6UX27 236 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 PSMG2Q969U7 264 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 MYLPFQ96A32 169 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 CEP295NLQ96MC4 621 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 TWNKQ96RR1 684 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 B3GNT5Q9BYG0 378 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 NDST4Q9H3R1 872 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 CD320Q9NPF0 282 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 CISHQ9NSE2 258 aa19.67■□□□□ 0.74
HDAC6-205ENST00000423941 MAGEC2Q9UBF1 373 aaPredicted RBP19.67■□□□□ 0.74
HDAC6-205ENST00000423941 DENND4CQ5VZ89 1909 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 SYCE3A1L190 88 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 SOAT2O75908 522 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 MICAL2O94851 1124 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 RHOP08100 348 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 TBXAS1P24557 533 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-205ENST00000423941 EPHB3P54753 998 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 NTHL1P78549 312 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 GCNT1Q02742 428 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 ZSCAN23Q3MJ62 389 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 MGAT5BQ3V5L5 792 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 HSP90AA4PQ58FG1 418 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms