RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OGTO15294 1046 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 NMT1P30419 496 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 NCKAP1LP55160 1127 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 NBR1Q14596 966 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 IL17AQ16552 155 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 USP39Q53GS9 565 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 NAIF1Q69YI7 327 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 TXNDC8Q6A555 127 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 JADE1Q6IE81 842 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 LRSAM1Q6UWE0 723 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 ABCA7Q8IZY2 2146 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 THEM5Q8N1Q8 247 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 CD101Q93033 1021 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 KCND2Q9NZV8 630 aa18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 NOL7Q9UMY1 257 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-202ENST00000423635 NUP205Q92621 2012 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 LAD1O00515 517 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 PIGRP01833 764 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 GBP1P32455 592 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 TOB1P50616 345 aaPredicted RBP18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 DGKEP52429 567 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 RAD51AP2Q09MP3 1159 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 HYIQ5T013 277 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 RASSF3Q86WH2 238 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 METTL23Q86XA0 190 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 CCDC26Q8TAB7 109 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 BICD1Q96G01 975 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 LARSQ9P2J5 1176 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 CPSF3Q9UKF6 684 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 DERAQ9Y315 318 aa18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 FASNP49327 2511 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-202ENST00000423635 A0A0B4J269 797 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 U2AF2P26368 475 aaKnown RBP eCLIP18.08■□□□□ 0.496e-8■■■■□ 22.6
CHCHD3-202ENST00000423635 PRPHP41219 470 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 LIG4P49917 911 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 CDR1P51861 262 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 IRX4P78413 519 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 CPA6Q8N4T0 437 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 OSCP1Q8WVF1 389 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 MRPS31Q92665 395 aaKnown RBP18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 CCSER1Q9C0I3 900 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 PCDHB6Q9Y5E3 794 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 DMXL2Q8TDJ6 3036 aa18.08■□□□□ 0.49
CHCHD3-202ENST00000423635 CYB561D2O14569 222 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 CSH1P0DML2 217 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 CSH2P0DML3 217 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 SCP2P22307 547 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 SLC12A3P55017 1021 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 FAM160A1Q05DH4 1040 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 MTF1Q14872 753 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 DTHD1Q6ZMT9 781 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 DCP1BQ8IZD4 617 aaKnown RBP18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 TSTD1Q8NFU3 115 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 PNMA5Q96PV4 448 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 LLPHQ9BRT6 129 aaKnown RBP18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 ASB7Q9H672 318 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 DUS2Q9NX74 493 aaKnown RBP18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 ABI2Q9NYB9 513 aaPredicted RBP18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 EVLQ9UI08 416 aaPredicted RBP18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 INVSQ9Y283 1065 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 NEUROG3Q9Y4Z2 214 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 AKAP13Q12802 2813 aa18.07■□□□□ 0.48
CHCHD3-202ENST00000423635 TSC2P49815 1807 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 PKD1L2Q7Z442 2459 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 PATE3B3GLJ2 98 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 NFICP08651 508 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 NEK4P51957 841 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 RING1Q06587 406 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 TMEM132DQ14C87 1099 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 ZNF77Q15935 545 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 EML3Q32P44 896 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 WSCD1Q658N2 575 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 CYP2U1Q7Z449 544 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 ATP2A3Q93084 1043 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 CNOT6LQ96LI5 555 aaKnown RBP18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 PYM1Q9BRP8 204 aaKnown RBP18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 PCDHB5Q9Y5E4 795 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 MYH11P35749 1972 aa18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 ZNF638Q14966 1978 aaKnown RBP18.06■□□□□ 0.48
CHCHD3-202ENST00000423635 SCN1AP35498 2009 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 ANK1P16157 1881 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 HNRNPDLO14979 420 aaKnown RBP18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 TAF6P49848 677 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 PSMD2Q13200 908 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 GNL2Q13823 731 aaKnown RBP18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 ARSHQ5FYA8 562 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 DEFB124Q8NES8 71 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 USP33Q8TEY7 942 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 MYRFLQ96LU7 910 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 MSTO1Q9BUK6 570 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 TPSD1Q9BZJ3 242 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 TMLHEQ9NVH6 421 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 UXTQ9UBK9 157 aaPredicted RBP18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 MSRB2Q9Y3D2 182 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 C2CD2Q9Y426 696 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 PCNX2A6NKB5 2137 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 THADAQ6YHU6 1953 aa18.05■□□□□ 0.48
CHCHD3-202ENST00000423635 NPHP3-ACAD11A0A0J9YXS1 232 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms