RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 LRRTM3Q86VH5 581 aa20.02■□□□□ 0.8
MCF2L-214ENST00000423251 C12orf76Q8N812 135 aaPredicted RBP20.02■□□□□ 0.8
MCF2L-214ENST00000423251 OR6B3Q8NGW1 331 aa20.02■□□□□ 0.8
MCF2L-214ENST00000423251 NIF3L1Q9GZT8 377 aa20.02■□□□□ 0.8
MCF2L-214ENST00000423251 SMYD3Q9H7B4 428 aa20.02■□□□□ 0.8
MCF2L-214ENST00000423251 FANCLQ9NW38 375 aa20.02■□□□□ 0.8
MCF2L-214ENST00000423251 HSFX1Q9UBD0 423 aa20.02■□□□□ 0.8
MCF2L-214ENST00000423251 PLXNA3P51805 1871 aa20.02■□□□□ 0.8
MCF2L-214ENST00000423251 TSC2P49815 1807 aa20.02■□□□□ 0.79
MCF2L-214ENST00000423251 CCDC195A0A1B0GUA6 201 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 PRRG1O14668 218 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 C8AP07357 584 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 HNRNPA1P09651 372 aaKnown RBP eCLIP20.01■□□□□ 0.79
MCF2L-214ENST00000423251 SP100P23497 879 aaPredicted RBP20.01■□□□□ 0.79
MCF2L-214ENST00000423251 ACAT1P24752 427 aaKnown RBP20.01■□□□□ 0.79
MCF2L-214ENST00000423251 HOXA9P31269 272 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 CDH8P55286 799 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 NFE2Q16621 373 aaPredicted RBP20.01■□□□□ 0.79
MCF2L-214ENST00000423251 SLC39A12Q504Y0 691 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 RARS2Q5T160 578 aaKnown RBP20.01■□□□□ 0.79
MCF2L-214ENST00000423251 FAM171BQ6P995 826 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 EHBP1Q8NDI1 1231 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 TATDN2Q93075 761 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 PKMYT1Q99640 499 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 TUBGCP2Q9BSJ2 902 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 SDCBP2Q9H190 292 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 FAM124BQ9H5Z6 455 aaPredicted RBP20.01■□□□□ 0.79
MCF2L-214ENST00000423251 CYP4F11Q9HBI6 524 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.01■□□□□ 0.79
MCF2L-214ENST00000423251 CDH22Q9UJ99 828 aa20.01■□□□□ 0.79
MCF2L-214ENST00000423251 SMTNL1A8MU46 457 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 SEC24AO95486 1093 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 VNN2O95498 520 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 CAVIN2O95810 425 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 PDGFRBP09619 1106 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 WEE2P0C1S8 567 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 NCAPHQ15003 741 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 MAPRE1Q15691 268 aaKnown RBP20■□□□□ 0.79
MCF2L-214ENST00000423251 VWA3BQ502W6 1294 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 HSP90AA4PQ58FG1 418 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 PPM1LQ5SGD2 360 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 TMC5Q6UXY8 1006 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 GPR149Q86SP6 731 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 UNC93AQ86WB7 457 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 TTC39CQ8N584 583 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 LMO3Q8TAP4 145 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 SLC7A14Q8TBB6 771 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 SPPL2BQ8TCT7 592 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 PBXIP1Q96AQ6 731 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 PGLYRP2Q96PD5 576 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 SYT15Q9BQS2 421 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 PRKD2Q9BZL6 878 aa20■□□□□ 0.79
MCF2L-214ENST00000423251 GTPBP10A4D1E9 387 aaKnown RBP19.99■□□□□ 0.79
MCF2L-214ENST00000423251 MTMR11A4FU01 709 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 A8MXQ7 604 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 HCRTO43612 131 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 RFPL2O75678 378 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 POU2F2P09086 479 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 RAP1GAPP47736 663 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 ZNF165P49910 485 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 DUSP4Q13115 394 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 ATAT1Q5SQI0 421 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 SCARA5Q6ZMJ2 495 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 BMP8AQ7Z5Y6 402 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 ATAD1Q8NBU5 361 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 PRSS33Q8NF86 280 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 NDST4Q9H3R1 872 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 GTF3C4Q9UKN8 822 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 NME7Q9Y5B8 376 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 PCDHB5Q9Y5E4 795 aa19.99■□□□□ 0.79
MCF2L-214ENST00000423251 ZDBF2Q9HCK1 2354 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 MYBPHLA2RUH7 354 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 ATP2C2O75185 946 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 PTPN1P18031 435 aaKnown RBP19.98■□□□□ 0.79
MCF2L-214ENST00000423251 MTHFRP42898 656 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 TUFMP49411 452 aaKnown RBP19.98■□□□□ 0.79
MCF2L-214ENST00000423251 INCA1Q0VD86 236 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 MIIPQ5JXC2 388 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 AOPEPQ8N6M6 819 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 ZNF707Q96C28 371 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-214ENST00000423251 TNIP3Q96KP6 325 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 RIPOR3Q96MK2 946 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 NECTIN4Q96NY8 510 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 NT5C1BQ96P26 610 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 ABCB6Q9NP58 842 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 TMLHEQ9NVH6 421 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 INSL5Q9Y5Q6 135 aa19.98■□□□□ 0.79
MCF2L-214ENST00000423251 LRRC10BA6NIK2 292 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 XYLBO75191 536 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 ZNF18P17022 549 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 TBXAS1P24557 533 aaPredicted RBP19.97■□□□□ 0.79
MCF2L-214ENST00000423251 NDST1P52848 882 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 IER5LQ5T953 404 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 GBP6Q6ZN66 633 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 SUGP1Q8IWZ8 645 aaKnown RBP19.97■□□□□ 0.79
MCF2L-214ENST00000423251 DHX40Q8IX18 779 aaKnown RBP19.97■□□□□ 0.79
MCF2L-214ENST00000423251 CRYBG2Q8N1P7 616 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 ANKRD20A12PQ8NF67 263 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 MYCBPAPQ8TBZ2 947 aa19.97■□□□□ 0.79
MCF2L-214ENST00000423251 FUBP3Q96I24 572 aaKnown RBP eCLIP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms