RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CNKSR3Q6P9H4 555 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 NYAP1Q6ZVC0 841 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 MCOLN2Q8IZK6 566 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 CCDC114Q96M63 670 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 WDR24Q96S15 920 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 PACSIN1Q9BY11 444 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 RGS18Q9NS28 235 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 COX16Q9P0S2 106 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 CDH9Q9ULB4 789 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 ABHD14A-ACY1A0A1B0GW23 586 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 CILPO75339 1184 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 KRT1P04264 644 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 PDGFRAP16234 1089 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 FECHP22830 423 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 CXCR5P32302 372 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 NKX3-2P78367 333 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 C15orf39Q6ZRI6 1047 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 CCDC117Q8IWD4 279 aaPredicted RBP7.82□□□□□ -1.16
BDNF-209ENST00000420794 TTC16Q8NEE8 873 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 RBM41Q96IZ5 413 aaKnown RBP7.82□□□□□ -1.16
BDNF-209ENST00000420794 ZNF558Q96NG5 402 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 ACP6Q9NPH0 428 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 PAK6Q9NQU5 681 aaPredicted RBP7.82□□□□□ -1.16
BDNF-209ENST00000420794 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.82□□□□□ -1.16
BDNF-209ENST00000420794 SLC12A6Q9UHW9 1150 aa7.82□□□□□ -1.16
BDNF-209ENST00000420794 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
BDNF-209ENST00000420794 MICAL2O94851 1124 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 STAU1O95793 577 aaKnown RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 FGBP02675 491 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 EDN1P05305 212 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 URODP06132 367 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 PFKMP08237 780 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 HSPA8P11142 646 aaKnown RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 NEFHP12036 1026 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 PTPN1P18031 435 aaKnown RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 RRM1P23921 792 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ACAT1P24752 427 aaKnown RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 GBP1P32455 592 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 CLCNKBP51801 687 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 FMO1Q01740 532 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 CDO1Q16878 200 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ZNF365Q70YC5 407 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 PDZD4Q76G19 769 aaPredicted RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 CCDC105Q8IYK2 499 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 LMO3Q8TAP4 145 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 RABGGTAQ92696 567 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 MCEEQ96PE7 176 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 RHOXF2Q9BQY4 288 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ABI2Q9NYB9 513 aaPredicted RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 TFR2Q9UP52 801 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 A0A0G2JMZ2 1700 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 LRRD1A4D1F6 860 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 EFCAB8A8MWE9 144 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 GAS8O95995 478 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 FAM163BP0C2L3 166 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 GJA8P48165 433 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 FAM26DQ5JW98 314 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ZNF662Q6ZS27 426 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 KLHL7Q8IXQ5 586 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 FAM126BQ8IXS8 530 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 KCTD6Q8NC69 237 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 SMG8Q8ND04 991 aaKnown RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 MYRIPQ8NFW9 859 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 TPCN2Q8NHX9 752 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 AVENQ9NQS1 362 aaPredicted RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.81□□□□□ -1.16
BDNF-209ENST00000420794 ALG6Q9Y672 507 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 DUSP10Q9Y6W6 482 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 V9GYY5 206 aaPredicted RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 PTPRJQ12913 1337 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 RBAK-RBAKDNI3L0D1 243 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 DYNC1I1O14576 645 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ATMINO43313 823 aaPredicted RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 ARL4AP40617 200 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ZNF268Q14587 947 aaPredicted RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 MGAT5BQ3V5L5 792 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 BTBD8Q5XKL5 378 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ZNF354CQ86Y25 554 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ZDHHC17Q8IUH5 632 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ELMOD1Q8N336 334 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 B3GALNT2Q8NCR0 500 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 LNX1Q8TBB1 728 aaPredicted RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 SLC2A14Q8TDB8 520 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 RUNDC3BQ96NL0 473 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 OSBPL9Q96SU4 736 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 ELOVL4Q9GZR5 314 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 VRTNQ9H8Y1 702 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 HOMER3Q9NSC5 361 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 DOCK3Q8IZD9 2030 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 PIK3R2O00459 728 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 FBXO21O94952 628 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 FGFR1P11362 822 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 TERF1P54274 439 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 BCAR1P56945 870 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 CALCOCO2Q13137 446 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 CYP4A22Q5TCH4 519 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 SMARCD1Q96GM5 515 aa7.81□□□□□ -1.16
BDNF-209ENST00000420794 MRPL45Q9BRJ2 306 aaKnown RBP7.81□□□□□ -1.16
BDNF-209ENST00000420794 CALN1Q9BXU9 219 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms