RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 GFAPP14136 432 aa8.83□□□□□ -1
UBR4-206ENST00000419533 TEDDM1Q5T9Z0 273 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ARMC6Q6NXE6 501 aa8.83□□□□□ -1
UBR4-206ENST00000419533 DDIASQ8IXT1 998 aa8.83□□□□□ -1
UBR4-206ENST00000419533 TNS4Q8IZW8 715 aa8.83□□□□□ -1
UBR4-206ENST00000419533 PTPRN2Q92932 1015 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ASPSCR1Q9BZE9 553 aa8.83□□□□□ -1
UBR4-206ENST00000419533 TUT1Q9H6E5 874 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 METTL5Q9NRN9 209 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 SENP1Q9P0U3 644 aa8.83□□□□□ -1
UBR4-206ENST00000419533 VWA5AO00534 786 aa8.83□□□□□ -1
UBR4-206ENST00000419533 MBL2P11226 248 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 BRD2P25440 801 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 C1QTNF8P60827 252 aa8.83□□□□□ -1
UBR4-206ENST00000419533 FMR1Q06787 632 aaKnown RBP eCLIP8.83□□□□□ -13e-7■■■□□ 16
UBR4-206ENST00000419533 NCAPHQ15003 741 aa8.83□□□□□ -1
UBR4-206ENST00000419533 MAPRE2Q15555 327 aa8.83□□□□□ -1
UBR4-206ENST00000419533 GLRA4Q5JXX5 417 aa8.83□□□□□ -1
UBR4-206ENST00000419533 KLHDC7AQ5VTJ3 777 aa8.83□□□□□ -1
UBR4-206ENST00000419533 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
UBR4-206ENST00000419533 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
UBR4-206ENST00000419533 FBXO32Q969P5 355 aa8.83□□□□□ -1
UBR4-206ENST00000419533 BTBD6Q96KE9 485 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ABHD16BQ9H3Z7 469 aa8.83□□□□□ -1
UBR4-206ENST00000419533 ZCCHC17Q9NP64 241 aaKnown RBP8.83□□□□□ -1
UBR4-206ENST00000419533 TRPM5Q9NZQ8 1165 aa8.83□□□□□ -1
UBR4-206ENST00000419533 DLG5Q8TDM6 1919 aa8.83□□□□□ -1
UBR4-206ENST00000419533 CCDC195A0A1B0GUA6 201 aa8.82□□□□□ -1
UBR4-206ENST00000419533 F5H5T6 163 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ATP5HO75947 161 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CABYRO75952 493 aa8.82□□□□□ -1
UBR4-206ENST00000419533 PYGLP06737 847 aa8.82□□□□□ -1
UBR4-206ENST00000419533 PEX19P40855 299 aa8.82□□□□□ -1
UBR4-206ENST00000419533 RGS4P49798 205 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SERPINB9P50453 376 aa8.82□□□□□ -1
UBR4-206ENST00000419533 AMPD2Q01433 879 aa8.82□□□□□ -1
UBR4-206ENST00000419533 PLD1Q13393 1074 aa8.82□□□□□ -1
UBR4-206ENST00000419533 PGM5Q15124 567 aa8.82□□□□□ -1
UBR4-206ENST00000419533 BOLA3Q53S33 107 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CTU1Q7Z7A3 348 aaKnown RBP8.82□□□□□ -1
UBR4-206ENST00000419533 ITIH5Q86UX2 942 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ADGRF2Q8IZF7 708 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CGRRF1Q99675 332 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SLC13A1Q9BZW2 595 aa8.82□□□□□ -1
UBR4-206ENST00000419533 NDE1Q9NXR1 346 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ZDHHC9Q9Y397 364 aa8.82□□□□□ -1
UBR4-206ENST00000419533 NFIBO00712 420 aa8.82□□□□□ -1
UBR4-206ENST00000419533 F9P00740 461 aa8.82□□□□□ -1
UBR4-206ENST00000419533 APRTP07741 180 aa8.82□□□□□ -1
UBR4-206ENST00000419533 RAG1P15918 1043 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SLC9A1P19634 815 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ESRRGP62508 458 aa8.82□□□□□ -1
UBR4-206ENST00000419533 GRB10Q13322 594 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CCDC144BQ3MJ40 725 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ZBTB41Q5SVQ8 909 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ATP8B4Q8TF62 1192 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SPATA16Q9BXB7 569 aa8.82□□□□□ -1
UBR4-206ENST00000419533 GPR63Q9BZJ6 419 aa8.82□□□□□ -1
UBR4-206ENST00000419533 RIOX1Q9H6W3 641 aa8.82□□□□□ -1
UBR4-206ENST00000419533 XPNPEP3Q9NQH7 507 aa8.82□□□□□ -1
UBR4-206ENST00000419533 RAB6BQ9NRW1 208 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.82□□□□□ -1
UBR4-206ENST00000419533 DBR1Q9UK59 544 aaKnown RBP8.82□□□□□ -1
UBR4-206ENST00000419533 TPX2Q9ULW0 747 aaKnown RBP8.82□□□□□ -1
UBR4-206ENST00000419533 PKP3Q9Y446 797 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CARNS1A5YM72 827 aa8.82□□□□□ -1
UBR4-206ENST00000419533 E2F6O75461 281 aa8.82□□□□□ -1
UBR4-206ENST00000419533 FBXO21O94952 628 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ALDH2P05091 517 aa8.82□□□□□ -1
UBR4-206ENST00000419533 BRAFP15056 766 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ITIH2P19823 946 aa8.82□□□□□ -1
UBR4-206ENST00000419533 HMOX2P30519 316 aa8.82□□□□□ -1
UBR4-206ENST00000419533 NPTX2P47972 431 aa8.82□□□□□ -1
UBR4-206ENST00000419533 POLD3Q15054 466 aaPredicted RBP8.82□□□□□ -1
UBR4-206ENST00000419533 GRIK4Q16099 956 aa8.82□□□□□ -1
UBR4-206ENST00000419533 TAF2Q6P1X5 1199 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SPATA17Q96L03 361 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SRPK1Q96SB4 655 aaKnown RBP8.82□□□□□ -1
UBR4-206ENST00000419533 PI4K2AQ9BTU6 479 aa8.82□□□□□ -1
UBR4-206ENST00000419533 WDCPQ9H6R7 721 aa8.82□□□□□ -1
UBR4-206ENST00000419533 TMEM39AQ9NV64 488 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SLC25A13Q9UJS0 675 aa8.82□□□□□ -1
UBR4-206ENST00000419533 SLC45A1Q9Y2W3 748 aa8.82□□□□□ -1
UBR4-206ENST00000419533 DUOX1Q9NRD9 1551 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ITGB4P16144 1822 aa8.82□□□□□ -1
UBR4-206ENST00000419533 TCRBV5S4A2TA0A5A2 114 aa8.82□□□□□ -1
UBR4-206ENST00000419533 ZNF263O14978 683 aa8.82□□□□□ -1
UBR4-206ENST00000419533 MED24O75448 989 aa8.82□□□□□ -1
UBR4-206ENST00000419533 DNAJC8O75937 253 aaPredicted RBP8.82□□□□□ -1
UBR4-206ENST00000419533 AMHP03971 560 aa8.82□□□□□ -1
UBR4-206ENST00000419533 HMGCRP04035 888 aa8.82□□□□□ -1
UBR4-206ENST00000419533 PDCD2Q16342 344 aaPredicted RBP8.82□□□□□ -1
UBR4-206ENST00000419533 KRT80Q6KB66 452 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CDR2LQ86X02 465 aaPredicted RBP8.82□□□□□ -1
UBR4-206ENST00000419533 IFNL1Q8IU54 200 aa8.82□□□□□ -1
UBR4-206ENST00000419533 RIOX2Q8IUF8 465 aa8.82□□□□□ -1
UBR4-206ENST00000419533 CDK5RAP1Q96SZ6 601 aaKnown RBP8.82□□□□□ -1
UBR4-206ENST00000419533 OLFML3Q9NRN5 406 aa8.82□□□□□ -1
UBR4-206ENST00000419533 RNASEH1O60930 286 aaKnown RBP8.81□□□□□ -1
UBR4-206ENST00000419533 CTDNEP1O95476 244 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms