RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RAP1GAPP47736 663 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 EPHB3P54753 998 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 MYL5Q02045 173 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 TWF1Q12792 350 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 MGAT5BQ3V5L5 792 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 IQCEQ6IPM2 695 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 FUBP3Q96I24 572 aaKnown RBP eCLIP24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 ZNF512Q96ME7 567 aaPredicted RBP24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 PKMYT1Q99640 499 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 WDR6Q9NNW5 1121 aaKnown RBP24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 SAMSN1Q9NSI8 373 aaKnown RBP24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 TMLHEQ9NVH6 421 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 YIPF1Q9Y548 306 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 MYBPHLA2RUH7 354 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 KCNJ18B7U540 433 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 HCRTO43612 131 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 ATP2C2O75185 946 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 LRRN2O75325 713 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 PTPN2P17706 415 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 PSMC1P62191 440 aaKnown RBP24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 KCNJ12Q14500 433 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 MAN2A1Q16706 1144 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 ADHFE1Q8IWW8 467 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 EHBP1Q8NDI1 1231 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 MYCBPAPQ8TBZ2 947 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 ADAMTS19Q8TE59 1207 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 TATDN2Q93075 761 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 NT5C1BQ96P26 610 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 SEPT5Q99719 369 aaPredicted RBP24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 TUBGCP2Q9BSJ2 902 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 SDCBP2Q9H190 292 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 POMKQ9H5K3 350 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 NR2E1Q9Y466 385 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 ASB3Q9Y575 518 aa24.63■■□□□ 1.53
SMARCB1-205ENST00000417137 SYCE3A1L190 88 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 HAPLN1P10915 354 aaPredicted RBP24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 COL9A1P20849 921 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 TBXAS1P24557 533 aaPredicted RBP24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 YWHAEP62258 255 aaKnown RBP24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 CFAP221Q4G0U5 840 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 ANO6Q4KMQ2 910 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 TCP11X2Q5H9J9 407 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 GRASPQ7Z6J2 395 aaPredicted RBP24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 B3GALNT2Q8NCR0 500 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 CRISPLD1Q9H336 500 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 CRTAC1Q9NQ79 661 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 CDH22Q9UJ99 828 aa24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 MTCL1Q9Y4B5 1905 aaKnown RBP24.62■■□□□ 1.53
SMARCB1-205ENST00000417137 TSC2P49815 1807 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 TPM2P07951 284 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 NDST1P52848 882 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 RPL10AP62906 217 aaKnown RBP24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 CYP27A1Q02318 531 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 INCA1Q0VD86 236 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 VEPH1Q14D04 833 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 NFKBIBQ15653 356 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 HSP90AA4PQ58FG1 418 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 MDH1BQ5I0G3 518 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 ITIH5Q86UX2 942 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 CRYBG2Q8N1P7 616 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 ANKRD20A12PQ8NF67 263 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 UHRF1Q96T88 793 aaPredicted RBP24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 BPIFA3Q9BQP9 254 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 NT5C1AQ9BXI3 368 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 FANCLQ9NW38 375 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 CLUHO75153 1309 aa24.61■■□□□ 1.53
SMARCB1-205ENST00000417137 GTPBP10A4D1E9 387 aaKnown RBP24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 SMTNL1A8MU46 457 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 CD58P19256 250 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 LRMPQ12912 555 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 CUL2Q13617 745 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 VWA3BQ502W6 1294 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 GBP6Q6ZN66 633 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 LEMD2Q8NC56 503 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 LMO3Q8TAP4 145 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 FAM200AQ8TCP9 573 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 MYLPFQ96A32 169 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 ACSF2Q96CM8 615 aaPredicted RBP24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 RPGRIP1Q96KN7 1286 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 DPEP3Q9H4B8 488 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 DNMT3BQ9UBC3 853 aaKnown RBP24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 USTQ9Y2C2 406 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 NME7Q9Y5B8 376 aa24.6■■□□□ 1.53
SMARCB1-205ENST00000417137 CILPO75339 1184 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 FSHRP23945 695 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 CYP2F1P24903 491 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 MAGEA11P43364 429 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 CDR1P51861 262 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 ZP2Q05996 745 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 TAF12Q16514 161 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 PABPC1LQ4VXU2 614 aaKnown RBP24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 CYP4A22Q5TCH4 519 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 CDKAL1Q5VV42 579 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 VSTM1Q6UX27 236 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 OTOP3Q7RTS5 596 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 ACOT1Q86TX2 421 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 TTC9BQ8N6N2 239 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 FEZF2Q8TBJ5 459 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 PCED1BQ96HM7 432 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 CORO1BQ9BR76 489 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms