RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 GTF3C4Q9UKN8 822 aa19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 ZFP37Q9Y6Q3 630 aaPredicted RBP19.25■□□□□ 0.67
SEMA3B-201ENST00000416295 HCRTO43612 131 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 VEPH1Q14D04 833 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 FAM171BQ6P995 826 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 SCARA5Q6ZMJ2 495 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 C4orf50Q6ZRC1 276 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 ITIH5Q86UX2 942 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 SPATA2LQ8IUW3 424 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 SLC35C1Q96A29 364 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 FUBP3Q96I24 572 aaKnown RBP eCLIP19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 SMYD3Q9H7B4 428 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 ASAH2Q9NR71 780 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 TMLHEQ9NVH6 421 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 RAB20Q9NX57 234 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 CEP72Q9P209 647 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 EPS15L1Q9UBC2 864 aa19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 MRPS23Q9Y3D9 190 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-201ENST00000416295 MYBPHLA2RUH7 354 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 A8MXQ7 604 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 ZNF197O14709 1029 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 N4BP1O75113 896 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 PDGFRBP09619 1106 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 HAPLN1P10915 354 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 NLRP12P59046 1061 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 PSMC1P62191 440 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 DPCR1Q3MIW9 517 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 CFAP221Q4G0U5 840 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 CYP4A22Q5TCH4 519 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 PDZD4Q76G19 769 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 FAXDC2Q96IV6 333 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 MYADMQ96S97 322 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 PI4K2AQ9BTU6 479 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 NIF3L1Q9GZT8 377 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 MUTYHQ9UIF7 546 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 CDH7Q9ULB5 785 aa19.23■□□□□ 0.67
SEMA3B-201ENST00000416295 ATP2C2O75185 946 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 SOAT2O75908 522 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 MICAL2O94851 1124 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 ASPAP45381 313 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 EPHA5P54756 1037 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 CDH8P55286 799 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 MARSP56192 900 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 RPL10AP62906 217 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 CBWD6Q4V339 395 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 WDR44Q5JSH3 913 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 CBWD3Q5JTY5 395 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 CBWD5Q5RIA9 395 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 SPOPLQ6IQ16 392 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 RBM43Q6ZSC3 357 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 MYCBPAPQ8TBZ2 947 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 FAM200AQ8TCP9 573 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 FGF13Q92913 245 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 PSMG2Q969U7 264 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 ELMO3Q96BJ8 720 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 TNIP3Q96KP6 325 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 BCO2Q9BYV7 579 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 DNAJC25Q9H1X3 360 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 CYP3A43Q9HB55 503 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 CRTAC1Q9NQ79 661 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 LIMD1Q9UGP4 676 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 COQ4Q9Y3A0 265 aa19.22■□□□□ 0.67
SEMA3B-201ENST00000416295 FGF19O95750 216 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 LAMP2P13473 410 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 PTPN1P18031 435 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 ATF6P18850 670 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 RAP1GAPP47736 663 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 CDR1P51861 262 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 TAF12Q16514 161 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 PTPN21Q16825 1174 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 TPD52L1Q16890 204 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 CT47A1Q5JQC4 288 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 PRSS36Q5K4E3 855 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 B3GALNT2Q8NCR0 500 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 ITFG1Q8TB96 612 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 SEMA4DQ92854 862 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 MYLPFQ96A32 169 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 SDCBP2Q9H190 292 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 APOBEC3GQ9HC16 384 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 IGSF9Q9P2J2 1179 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 MAGEC2Q9UBF1 373 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 NME7Q9Y5B8 376 aa19.21■□□□□ 0.67
SEMA3B-201ENST00000416295 MYL4P12829 197 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 CYP2F1P24903 491 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 ERCC5P28715 1186 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 MAGEA11P43364 429 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 FMO5P49326 533 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 CYP27A1Q02318 531 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 CETN1Q12798 172 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 CCDC142Q17RM4 750 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 SLC5A9Q2M3M2 681 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 MDH1BQ5I0G3 518 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 CCDC183Q5T5S1 534 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 VSTM1Q6UX27 236 aa19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 DNAJB7Q7Z6W7 309 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-201ENST00000416295 UNC93AQ86WB7 457 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms