RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 DDX21Q9NR30 783 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPRK-209ENST00000415046 PTGFRNQ9P2B2 879 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 MAP3K2Q9Y2U5 619 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 CARMIL3Q8ND23 1372 aa5.49□□□□□ -1.53
PTPRK-209ENST00000415046 MAP3K15Q6ZN16 1313 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 POLRMTO00411 1230 aaKnown RBP5.48□□□□□ -1.53
PTPRK-209ENST00000415046 WNT10BO00744 389 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 CDKL5O76039 1030 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 MTHFD2P13995 350 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 SLFN5Q08AF3 891 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 SCAPQ12770 1279 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 FOXI1Q12951 378 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 RESTQ13127 1097 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 PRR16Q569H4 304 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 RRP12Q5JTH9 1297 aaKnown RBP5.48□□□□□ -1.53
PTPRK-209ENST00000415046 CCDC30Q5VVM6 783 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 G2E3Q7L622 706 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 KCNK18Q7Z418 384 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 DRC7Q8IY82 874 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 LMBR1Q8WVP7 490 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 HOXB13Q92826 284 aaPredicted RBP5.48□□□□□ -1.53
PTPRK-209ENST00000415046 CAVIN3Q969G5 261 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 QRSL1Q9H0R6 528 aaKnown RBP5.48□□□□□ -1.53
PTPRK-209ENST00000415046 IFT122Q9HBG6 1241 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 KLHL11Q9NVR0 708 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 HYPKQ9NX55 129 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 DBF4Q9UBU7 674 aaPredicted RBP5.48□□□□□ -1.53
PTPRK-209ENST00000415046 NIP7Q9Y221 180 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRK-209ENST00000415046 ATP11BQ9Y2G3 1177 aa5.48□□□□□ -1.53
PTPRK-209ENST00000415046 PXDNLA1KZ92 1463 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 BRINP1O60477 761 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 SERPINB2P05120 415 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 ELANEP08246 267 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 TM4SF1P30408 202 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 GUCY1A2P33402 732 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 SOX5P35711 763 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 SREBF1P36956 1147 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 CCT2P78371 535 aaKnown RBP5.47□□□□□ -1.53
PTPRK-209ENST00000415046 ANO4Q32M45 955 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 AFMIDQ63HM1 303 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 NBPF5PQ86XG9 351 aaPredicted RBP5.47□□□□□ -1.53
PTPRK-209ENST00000415046 MAPKAPK5Q8IW41 473 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 CMIPQ8IY22 773 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 AFAP1L2Q8N4X5 818 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 UBR7Q8N806 425 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 CNBD1Q8NA66 436 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 TGFBRAP1Q8WUH2 860 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 FATE1Q969F0 183 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 FUBP3Q96I24 572 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPRK-209ENST00000415046 GREM2Q9H772 168 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 CAAP1Q9H8G2 361 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 RBM12Q9NTZ6 932 aaKnown RBP5.47□□□□□ -1.53
PTPRK-209ENST00000415046 TNFRSF18Q9Y5U5 241 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 ATP10DQ9P241 1426 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 ZBED9Q6R2W3 1325 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 UBN2Q6ZU65 1347 aa5.47□□□□□ -1.53
PTPRK-209ENST00000415046 ADCY9O60503 1353 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 ABCC12Q96J65 1359 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 A0A0G2JLW4 131 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 GOLGA8AA7E2F4 631 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 ERVV-1B6SEH8 477 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 ESRRBO95718 433 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 FOSP01100 380 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-209ENST00000415046 CHRNA5P30532 468 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 RAP2BP61225 183 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 PPP3CAQ08209 521 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 MUM1L1Q5H9M0 696 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 B3GNTL1Q67FW5 361 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-209ENST00000415046 PRR5LQ6MZQ0 368 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 SYCE2Q6PIF2 218 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 FAM180AQ6UWF9 173 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 FBXO18Q8NFZ0 1043 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 FUBP1Q96AE4 644 aaKnown RBP5.46□□□□□ -1.54
PTPRK-209ENST00000415046 UHRF1Q96T88 793 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-209ENST00000415046 MYD88Q99836 296 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 SYT17Q9BSW7 474 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 ACE2Q9BYF1 805 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-209ENST00000415046 R3HDMLQ9H3Y0 253 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 LANCL2Q9NS86 450 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 MOCS1Q9NZB8 636 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 COX11Q9Y6N1 276 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 MAST3O60307 1309 aa5.46□□□□□ -1.54
PTPRK-209ENST00000415046 LRRC37AA6NMS7 1700 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 COL4A1P02462 1669 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 PI4KAP2A4QPH2 592 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 DDX58O95786 925 aaKnown RBP5.45□□□□□ -1.54
PTPRK-209ENST00000415046 ITGAMP11215 1152 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 DPEP1P16444 411 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 C21orf58P58505 322 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 MRPS21P82921 87 aaKnown RBP5.45□□□□□ -1.54
PTPRK-209ENST00000415046 OCA2Q04671 838 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 MPP3Q13368 585 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 GPR162Q16538 588 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 ERCC6LQ2NKX8 1250 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 CLEC4GQ6UXB4 293 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 MED25Q71SY5 747 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 C2CD5Q86YS7 1000 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 ZNF34Q8IZ26 560 aa5.45□□□□□ -1.54
PTPRK-209ENST00000415046 PQLC1Q8N2U9 271 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms