RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 CD19P15391 556 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 HADHBP55084 474 aaKnown RBP11.98□□□□□ -0.49
LINC00330-201ENST00000414562 CDH8P55286 799 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 TCEAL1Q15170 157 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 FAM109BQ6ICB4 259 aaPredicted RBP11.98□□□□□ -0.49
LINC00330-201ENST00000414562 NT5DC3Q86UY8 548 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 MCOLN2Q8IZK6 566 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 PDCL2Q8N4E4 241 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 ZNF564Q8TBZ8 553 aaPredicted RBP11.98□□□□□ -0.49
LINC00330-201ENST00000414562 PBKQ96KB5 322 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 RHOXF2Q9BQY4 288 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 BCO2Q9BYV7 579 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 EPC1Q9H2F5 836 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 ELAC1Q9H777 363 aaKnown RBP11.98□□□□□ -0.49
LINC00330-201ENST00000414562 SMYD3Q9H7B4 428 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 CYP3A43Q9HB55 503 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 TBC1D13Q9NVG8 400 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 ARGLU1Q9NWB6 273 aaPredicted RBP11.98□□□□□ -0.49
LINC00330-201ENST00000414562 UVRAGQ9P2Y5 699 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 RNF14Q9UBS8 474 aa11.98□□□□□ -0.49
LINC00330-201ENST00000414562 CHORDC1Q9UHD1 332 aaPredicted RBP11.98□□□□□ -0.49
LINC00330-201ENST00000414562 DGKIO75912 1065 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 FGBP02675 491 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 CFHP08603 1231 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 PBX3P40426 434 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 CENPCQ03188 943 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 PPIGQ13427 754 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00330-201ENST00000414562 MESDQ14696 234 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 SPRED2Q7Z698 418 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 NOA1Q8NC60 698 aaKnown RBP11.97□□□□□ -0.49
LINC00330-201ENST00000414562 MS4A14Q96JA4 679 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 ADAM22Q9P0K1 906 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 CEP83Q9Y592 693 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 PCDHB7Q9Y5E2 793 aa11.97□□□□□ -0.49
LINC00330-201ENST00000414562 CASTOR2A6NHX0 329 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 PIRO00625 290 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 MED7O43513 233 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 XPOTO43592 962 aaKnown RBP11.96□□□□□ -0.49
LINC00330-201ENST00000414562 CEP104O60308 925 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 MTA2O94776 668 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 NOMO3P69849 1222 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 DSC1Q08554 894 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 C2orf54Q08AI8 447 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 PAN2Q504Q3 1202 aaKnown RBP11.96□□□□□ -0.49
LINC00330-201ENST00000414562 NOMO2Q5JPE7 1267 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 C9orf57Q5W0N0 161 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 C11orf63Q6NUN7 778 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.49
LINC00330-201ENST00000414562 SMARCAL1Q9NZC9 954 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 EHD2Q9NZN4 543 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 UBQLN1Q9UMX0 589 aaKnown RBP11.96□□□□□ -0.49
LINC00330-201ENST00000414562 STXBP5LQ9Y2K9 1186 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 NME7Q9Y5B8 376 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 ALG6Q9Y672 507 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 GBF1Q92538 1859 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 KIAA1671Q9BY89 1806 aa11.96□□□□□ -0.49
LINC00330-201ENST00000414562 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 H0YGN5 161 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 CES2O00748 559 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 LSM8O95777 96 aaKnown RBP11.96□□□□□ -0.5
LINC00330-201ENST00000414562 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.5
LINC00330-201ENST00000414562 PAEPP09466 180 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 LINC00271P0C7V0 271 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 CLCNKBP51801 687 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.5
LINC00330-201ENST00000414562 SHHQ15465 462 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 FBXO38Q6PIJ6 1188 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 PHLDB2Q86SQ0 1253 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 TMEM173Q86WV6 379 aaPredicted RBP11.96□□□□□ -0.5
LINC00330-201ENST00000414562 NPAS4Q8IUM7 802 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 HACE1Q8IYU2 909 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 TTC39CQ8N584 583 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 TMEM35BQ8NCS4 154 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 PGBD4Q96DM1 585 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 C11orf70Q9BRQ4 267 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 PARD6BQ9BYG5 372 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 SDCBP2Q9H190 292 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 NRDE2Q9H7Z3 1164 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 ABCB6Q9NP58 842 aa11.96□□□□□ -0.5
LINC00330-201ENST00000414562 AVENQ9NQS1 362 aaPredicted RBP11.96□□□□□ -0.5
LINC00330-201ENST00000414562 SPOPO43791 374 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 THP07101 528 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 PFKMP08237 780 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 SKIP12755 728 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 RRM1P23921 792 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 RAD23BP54727 409 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
LINC00330-201ENST00000414562 MMS22LQ6ZRQ5 1243 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 RINLQ6ZS11 566 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 MON1BQ7L1V2 547 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 ZNF572Q7Z3I7 529 aaPredicted RBP11.95□□□□□ -0.5
LINC00330-201ENST00000414562 COLGALT2Q8IYK4 626 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 UBL4BQ8N7F7 174 aa11.95□□□□□ -0.5
LINC00330-201ENST00000414562 SPATA4Q8NEY3 305 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms