RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CREMQ03060 361 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 BST2Q10589 180 aaKnown RBP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 TUSC3Q13454 348 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 MAP7D1Q3KQU3 841 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 CXorf38Q8TB03 319 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 TRPV6Q9H1D0 765 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 ENTPD7Q9NQZ7 604 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 PCDHB5Q9Y5E4 795 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 DNM1LO00429 736 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 PIGRP01833 764 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 CUL1Q13616 776 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 FAM171A1Q5VUB5 890 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SPOPLQ6IQ16 392 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 CASC4Q6P4E1 433 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 DCLRE1AQ6PJP8 1040 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 CPLX4Q7Z7G2 160 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 C1orf131Q8NDD1 294 aaKnown RBP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 UBA3Q8TBC4 463 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 FAM124BQ9H5Z6 455 aaPredicted RBP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SAMD15Q9P1V8 674 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 WRAP73Q9P2S5 460 aaPredicted RBP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 PCSK1NQ9UHG2 260 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 PAIP2BQ9ULR5 123 aaKnown RBP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 NOC2LQ9Y3T9 749 aaKnown RBP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SF3B1O75533 1304 aaKnown RBP eCLIP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 TARSL2A2RTX5 802 aaKnown RBP8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SGPL1O95470 568 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 NFICP08651 508 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SLC2A3P11169 496 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SERPINB6P35237 376 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 NDST1P52848 882 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SATB1Q01826 763 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 MTF1Q14872 753 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SLC9A5Q14940 896 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 AMHR2Q16671 573 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 CBWD6Q4V339 395 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 ARHGAP15Q53QZ3 475 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 CBWD3Q5JTY5 395 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 CBWD5Q5RIA9 395 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 DENND2CQ68D51 928 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 RAD9BQ6WBX8 426 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 SLC35G2Q8TBE7 412 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 FEZF2Q8TBJ5 459 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 PDZD7Q9H5P4 517 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 HES2Q9Y543 173 aa8.96□□□□□ -0.98
SYNE1-211ENST00000413186 MYH4Q9Y623 1939 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 C2CD2LO14523 706 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 SMIM24O75264 130 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 EOMESO95936 686 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 F9P00740 461 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 FGGP02679 453 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 CYBAP13498 195 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ARHGAP25P42331 645 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 SULT1E1P49888 294 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 DYNLT1P63172 113 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ATP11AP98196 1134 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 MAPK7Q13164 816 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 NME3Q13232 169 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 FAM187BQ17R55 369 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 CC2D1AQ6P1N0 951 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ARHGEF18Q6ZSZ5 1173 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
SYNE1-211ENST00000413186 FIBCD1Q8N539 461 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 VCPIP1Q96JH7 1222 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 KRT12Q99456 494 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 EMILIN2Q9BXX0 1053 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ARHGAP39Q9C0H5 1083 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ELOVL4Q9GZR5 314 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 TJP2Q9UDY2 1190 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 STK39Q9UEW8 545 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 A0A1B0GUA9 196 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 GPD1P21695 349 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 PHBP35232 272 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 CLCN6P51797 869 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 DAW1Q8N136 415 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 P3H4Q92791 437 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 UNC93B1Q9H1C4 597 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 DHX35Q9H5Z1 703 aaKnown RBP8.95□□□□□ -0.98
SYNE1-211ENST00000413186 RSPH14Q9UHP6 348 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 HPCAL4Q9UM19 191 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 SCN9AQ15858 1988 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 VGLL3A8MV65 326 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 CASQ2O14958 399 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-211ENST00000413186 PFDN6O15212 129 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 CTIFO43310 598 aaKnown RBP8.95□□□□□ -0.98
SYNE1-211ENST00000413186 CYP3A5P20815 502 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ACO1P21399 889 aaKnown RBP8.95□□□□□ -0.98
SYNE1-211ENST00000413186 TUFMP49411 452 aaKnown RBP8.95□□□□□ -0.98
SYNE1-211ENST00000413186 TLE2Q04725 743 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 PLD1Q13393 1074 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 AP1ARQ63HQ0 302 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 CCDC121Q6ZUS5 278 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 NUDT18Q6ZVK8 323 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ITIH5Q86UX2 942 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 EFCAB13Q8IY85 973 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 HELQQ8TDG4 1101 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 ZNF606Q8WXB4 792 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 MSRAQ9UJ68 235 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 LAMA4Q16363 1823 aa8.95□□□□□ -0.98
SYNE1-211ENST00000413186 A0A087X0T9 212 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms