RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 HIC1Q14526 733 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 CCL14Q16627 93 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 EMC10Q5UCC4 262 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 TXNRD3NBQ6F5E7 133 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 MFSD7Q6UXD7 560 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 XYLT1Q86Y38 959 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 JOSD2Q8TAC2 188 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 SNX27Q96L92 541 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 HEXIM2Q96MH2 286 aaKnown RBP25.92■■□□□ 1.74
VRK2-202ENST00000412104 FAM118BQ9BPY3 351 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 SYNCQ9H7C4 482 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 WDR35Q9P2L0 1181 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 DERAQ9Y315 318 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 TRPM7Q96QT4 1865 aa25.92■■□□□ 1.74
VRK2-202ENST00000412104 TP73O15350 636 aa25.91■■□□□ 1.74
VRK2-202ENST00000412104 ITGBL1O95965 494 aaPredicted RBP25.91■■□□□ 1.74
VRK2-202ENST00000412104 PSMA2P25787 234 aa25.91■■□□□ 1.74
VRK2-202ENST00000412104 IFFO1Q0D2I5 559 aa25.91■■□□□ 1.74
VRK2-202ENST00000412104 NOTUMQ6P988 496 aa25.91■■□□□ 1.74
VRK2-202ENST00000412104 FAM124BQ9H5Z6 455 aaPredicted RBP25.91■■□□□ 1.74
VRK2-202ENST00000412104 HMGCRP04035 888 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 KRT10P13645 584 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 DARSP14868 501 aaKnown RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 IRAK1P51617 712 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 ZNF157P51786 506 aaPredicted RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 HNRNPH2P55795 449 aaKnown RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 GNGT1P63211 74 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 ADCY2Q08462 1091 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 CNGA2Q16280 664 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 DENND2CQ68D51 928 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 USP6NLQ92738 828 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 SNF8Q96H20 258 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 ZMAT2Q96NC0 199 aaKnown RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 LRRC4CQ9HCJ2 640 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 METTL5Q9NRN9 209 aaKnown RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 NEU2Q9Y3R4 380 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 GRIN2DO15399 1336 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 MANSC4A6NHS7 340 aaPredicted RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 ATF7P17544 494 aaPredicted RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 IVDP26440 423 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 PSEN2P49810 448 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 MYO1EQ12965 1108 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 PDCLQ13371 301 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 SLMAPQ14BN4 828 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 TRIP13Q15645 432 aaPredicted RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 KRT71Q3SY84 523 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 AGBL2Q5U5Z8 902 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 KAZNQ674X7 775 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 SPOCD1Q6ZMY3 1216 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 TTC39CQ8N584 583 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 FNIP1Q8TF40 1166 aa25.9■■□□□ 1.74
VRK2-202ENST00000412104 DDX56Q9NY93 547 aaKnown RBP25.9■■□□□ 1.74
VRK2-202ENST00000412104 SCN1AP35498 2009 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 SHBGP04278 402 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 ITIH2P19823 946 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 GPD2P43304 727 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 COPS2P61201 443 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 ADAM17P78536 824 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 ZNF268Q14587 947 aaPredicted RBP25.89■■□□□ 1.74
VRK2-202ENST00000412104 PCBP1Q15365 356 aaKnown RBP eCLIP25.89■■□□□ 1.74
VRK2-202ENST00000412104 RAPGEF5Q92565 580 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 ACSF2Q96CM8 615 aaPredicted RBP25.89■■□□□ 1.74
VRK2-202ENST00000412104 SEMA4AQ9H3S1 761 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 HES2Q9Y543 173 aa25.89■■□□□ 1.74
VRK2-202ENST00000412104 HAS3O00219 553 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 RARGP13631 454 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 CYP2B6P20813 491 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 PTPN7P35236 360 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 GABRB2P47870 512 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 YARSP54577 528 aaKnown RBP25.88■■□□□ 1.73
VRK2-202ENST00000412104 ODF2Q5BJF6 829 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 TTC19Q6DKK2 380 aaPredicted RBP25.88■■□□□ 1.73
VRK2-202ENST00000412104 RHBDF2Q6PJF5 856 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 DPH6Q7L8W6 267 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 POLNQ7Z5Q5 900 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 DNAJB3Q8WWF6 145 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 TUBGCP4Q9UGJ1 667 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 TJP3O95049 919 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 ATF2P15336 505 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 CYP3A5P20815 502 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 CPT1AP50416 773 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 SLC25A11Q02978 314 aaKnown RBP25.88■■□□□ 1.73
VRK2-202ENST00000412104 EMC1Q8N766 993 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 NT5C1AQ9BXI3 368 aa25.88■■□□□ 1.73
VRK2-202ENST00000412104 BCCIPQ9P287 314 aaKnown RBP eCLIP25.88■■□□□ 1.73
VRK2-202ENST00000412104 PDCD11Q14690 1871 aaKnown RBP25.87■■□□□ 1.73
VRK2-202ENST00000412104 hCG_1818297A0A087WSY0 165 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 LRRD1A4D1F6 860 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 A6NNZ2 444 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 PPEF2O14830 753 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 EIF3HO15372 352 aaKnown RBP eCLIP25.87■■□□□ 1.73
VRK2-202ENST00000412104 LRCH4O75427 683 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 MYL3P08590 195 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 HPDP32754 393 aaPredicted RBP25.87■■□□□ 1.73
VRK2-202ENST00000412104 TUBB8Q3ZCM7 444 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 UBAP2Q5T6F2 1119 aaKnown RBP25.87■■□□□ 1.73
VRK2-202ENST00000412104 ARFGAP1Q8N6T3 406 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 UBA3Q8TBC4 463 aa25.87■■□□□ 1.73
VRK2-202ENST00000412104 NXF3Q9H4D5 531 aaKnown RBP25.87■■□□□ 1.73
VRK2-202ENST00000412104 TRIP12Q14669 1992 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms