RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 GRXCR2A6NFK2 248 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 PRRG1O14668 218 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 ATP2C2O75185 946 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 CILPO75339 1184 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 TBXAS1P24557 533 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 DUSP4Q13115 394 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 CUL2Q13617 745 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 KRT31Q15323 416 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 CFAP221Q4G0U5 840 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 TMC5Q6UXY8 1006 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 GBP6Q6ZN66 633 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 CRYBG2Q8N1P7 616 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 MYCBPAPQ8TBZ2 947 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 FUBP3Q96I24 572 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 TNIP3Q96KP6 325 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 INTS2Q9H0H0 1204 aaKnown RBP16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 CRISPLD1Q9H336 500 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 ABCB6Q9NP58 842 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 GCNT4Q9P109 453 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 PCDHB5Q9Y5E4 795 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 INSL5Q9Y5Q6 135 aa16.47■□□□□ 0.23
TRAPPC12-203ENST00000411973 NCOR1O75376 2440 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 PTPN1P18031 435 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 TUFMP49411 452 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 NDST1P52848 882 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 GCNT1Q02742 428 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 LRMPQ12912 555 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 SMAD2Q15796 467 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 EXOC3L4Q17RC7 722 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 C4orf50Q6ZRC1 276 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 B3GALNT2Q8NCR0 500 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 ANKRD20A12PQ8NF67 263 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 WHAMMQ8TF30 809 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 RIPOR3Q96MK2 946 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 NECTIN4Q96NY8 510 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 ASB2Q96Q27 587 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 ARID3AQ99856 593 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 CRACR2AQ9BSW2 395 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 APOL5Q9BWW9 433 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 DPEP3Q9H4B8 488 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 CISHQ9NSE2 258 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 FAM50BQ9Y247 325 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 USP15Q9Y4E8 981 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 YIPF1Q9Y548 306 aa16.46■□□□□ 0.23
TRAPPC12-203ENST00000411973 C5orf42Q9H799 3197 aa16.46■□□□□ 0.22
TRAPPC12-203ENST00000411973 BECN2A8MW95 431 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 TPM2P07951 284 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 HAPLN1P10915 354 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 SLC9A1P19634 815 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 CDK11BP21127 795 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 PON1P27169 355 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 MTHFRP42898 656 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 KCNQ1P51787 676 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 YWHAEP62258 255 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 CBX2Q14781 532 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 ATAT1Q5SQI0 421 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 SMYD5Q6GMV2 418 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 TRIM65Q6PJ69 517 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 LRSAM1Q6UWE0 723 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 APTXQ7Z2E3 356 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 UBR7Q8N806 425 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 SMG7Q92540 1137 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 PCED1BQ96HM7 432 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 FAM81BQ96LP2 452 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 CBX8Q9HC52 389 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 ABI2Q9NYB9 513 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 TAB2Q9NYJ8 693 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 HMGXB4Q9UGU5 601 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 SLC27A5Q9Y2P5 690 aa16.45■□□□□ 0.22
TRAPPC12-203ENST00000411973 DENND4AQ7Z401 1863 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 XYLBO75191 536 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 LRG1P02750 347 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 BMP1P13497 986 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 ATP1A3P13637 1013 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 CD58P19256 250 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 TRIM21P19474 475 aaKnown RBP16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 MAGEA11P43364 429 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 COPB1P53618 953 aaKnown RBP16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 TWF1Q12792 350 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 PLD1Q13393 1074 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 CCDC142Q17RM4 750 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 MDH1BQ5I0G3 518 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 PHLDB3Q6NSJ2 640 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 VSTM1Q6UX27 236 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 SPATA2LQ8IUW3 424 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 ARHGEF19Q8IW93 802 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 PPM1KQ8N3J5 372 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 TTC9BQ8N6N2 239 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 FEZF2Q8TBJ5 459 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 FAM200AQ8TCP9 573 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 MYLPFQ96A32 169 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 JAKMIP2Q96AA8 810 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 TWNKQ96RR1 684 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms