RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 MS4A7Q9GZW8 240 aaPredicted RBP4.92□□□□□ -1.62
CLHC1-205ENST00000411884 A1CFQ9NQ94 594 aaKnown RBP4.92□□□□□ -1.62
CLHC1-205ENST00000411884 SLC52A1Q9NWF4 448 aa4.92□□□□□ -1.62
CLHC1-205ENST00000411884 CORO2BQ9UQ03 480 aa4.92□□□□□ -1.62
CLHC1-205ENST00000411884 PAXBP1Q9Y5B6 917 aa4.92□□□□□ -1.62
CLHC1-205ENST00000411884 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLHC1-205ENST00000411884 A0A0B4J269 797 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 MBD3L4A6NDZ8 208 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 MBD3L3A6NE82 208 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 F5H697 171 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 PYCARD-AS1I3L0S3 204 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 MYO1CO00159 1063 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 KPNA5O15131 536 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 MYL3P08590 195 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ITGAMP11215 1152 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 CYP2C9P11712 490 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ITGALP20701 1170 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 TM4SF4P48230 202 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 PRIM2P49643 509 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 HNRNPMP52272 730 aaKnown RBP eCLIP4.91□□□□□ -1.622e-6■■■■□ 25
CLHC1-205ENST00000411884 LILRA4P59901 499 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 HTRA4P83105 476 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 PICALMQ13492 652 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 TUBB3Q13509 450 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 PTPAQ15257 358 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 SF3B3Q15393 1217 aaKnown RBP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ZIK1Q3SY52 487 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 SLC44A4Q53GD3 710 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 RBM20Q5T481 1227 aaKnown RBP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 VPS53Q5VIR6 699 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ABHD17BQ5VST6 288 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ZDHHC24Q6UX98 284 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ZNF627Q7L945 461 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ZNF280BQ86YH2 543 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 SLC30A5Q8TAD4 765 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 SSH3Q8TE77 659 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 PARD3BQ8TEW8 1205 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 PTCD3Q96EY7 689 aaKnown RBP4.91□□□□□ -1.62
CLHC1-205ENST00000411884 MOGAT1Q96PD6 335 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 OSBPL9Q96SU4 736 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 AMBRA1Q9C0C7 1298 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 TBCCD1Q9NVR7 557 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 SYBUQ9NX95 663 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 PHTF1Q9UMS5 762 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 SNX13Q9Y5W8 968 aa4.91□□□□□ -1.62
CLHC1-205ENST00000411884 GRID2IPA4D2P6 1211 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 FOXN3O00409 490 aaPredicted RBP4.9□□□□□ -1.63
CLHC1-205ENST00000411884 ADH4P08319 380 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 SRGNP10124 158 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 XRCC6P12956 609 aaKnown RBP eCLIP4.9□□□□□ -1.63
CLHC1-205ENST00000411884 IL1R1P14778 569 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 KRT4P19013 534 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 KLRC1P26715 233 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 MCM7P33993 719 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 PXNP49023 591 aaPredicted RBP4.9□□□□□ -1.63
CLHC1-205ENST00000411884 ALDH5A1P51649 535 aaPredicted RBP4.9□□□□□ -1.63
CLHC1-205ENST00000411884 LOXL3P58215 753 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 ZXDAP98168 799 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 ABHD18Q0P651 414 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 ULK2Q8IYT8 1036 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 RAPGEF4Q8WZA2 1011 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 LPIN2Q92539 896 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 SLC39A13Q96H72 371 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 Q96MF0 132 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 PTDSS2Q9BVG9 487 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 ZNF700Q9H0M5 742 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 RGS17Q9UGC6 210 aaPredicted RBP4.9□□□□□ -1.63
CLHC1-205ENST00000411884 TESQ9UGI8 421 aaKnown RBP4.9□□□□□ -1.63
CLHC1-205ENST00000411884 TBC1D30Q9Y2I9 924 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 HS3ST3A1Q9Y663 406 aa4.9□□□□□ -1.63
CLHC1-205ENST00000411884 PROM1O43490 865 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 TRIAP1O43715 76 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 PLIN1O60240 522 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 FZD7O75084 574 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 IL18RAPO95256 599 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 PPP3CBP16298 524 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 TSHRP16473 764 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 CD6P30203 668 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 ACVRL1P37023 503 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 IFIT5Q13325 482 aaKnown RBP4.89□□□□□ -1.63
CLHC1-205ENST00000411884 DAG1Q14118 895 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 UBE4AQ14139 1066 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 LONRF1Q17RB8 773 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 PLA1AQ53H76 456 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 SYCP2LQ5T4T6 812 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 VWA1Q6PCB0 445 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 LAYNQ6UX15 382 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 Q6YL49 198 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 TSHZ1Q6ZSZ6 1077 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 RNF152Q8N8N0 203 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 SPSB4Q96A44 273 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 BRIP1Q9BX63 1249 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 STK31Q9BXU1 1019 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 CHST8Q9H2A9 424 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 XPNPEP3Q9NQH7 507 aa4.89□□□□□ -1.63
CLHC1-205ENST00000411884 KCTD5Q9NXV2 234 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms