RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MTMR3Q13615 1198 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 GNASQ5JWF2 1037 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 UBLCP1Q8WVY7 318 aaPredicted RBP21.87■■□□□ 1.09
USP39-203ENST00000409470 ATG4AQ8WYN0 398 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 CHST7Q9NS84 486 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 RNF19AQ9NV58 838 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 GOLGA6AQ9NYA3 693 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 PARP2Q9UGN5 583 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 KIAA1257Q9ULG3 409 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 KRT1P04264 644 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 ERBB2P04626 1255 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 PSMA2P25787 234 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 RFC1P35251 1148 aaPredicted RBP21.87■■□□□ 1.09
USP39-203ENST00000409470 PSMC4P43686 418 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 RPL21P46778 160 aaKnown RBP21.87■■□□□ 1.09
USP39-203ENST00000409470 DHX9Q08211 1270 aaKnown RBP21.87■■□□□ 1.09
USP39-203ENST00000409470 ATP13A4Q4VNC1 1196 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 MFSD14CQ5VZR4 134 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 ALKAL1Q6UXT8 129 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 TMC3Q7Z5M5 1100 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 RCOR2Q8IZ40 523 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 UBA3Q8TBC4 463 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 RBM41Q96IZ5 413 aaKnown RBP21.87■■□□□ 1.09
USP39-203ENST00000409470 ZIC5Q96T25 663 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 ZDHHC18Q9NUE0 388 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 KLK14Q9P0G3 267 aa21.87■■□□□ 1.09
USP39-203ENST00000409470 UBQLN1Q9UMX0 589 aaKnown RBP21.87■■□□□ 1.09
USP39-203ENST00000409470 KPNA6O60684 536 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 KRT14P02533 472 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 ATF7P17544 494 aaPredicted RBP21.86■■□□□ 1.09
USP39-203ENST00000409470 TM4SF4P48230 202 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 PDCLQ13371 301 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 LRRC38Q5VT99 294 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 PAXIP1Q6ZW49 1069 aaPredicted RBP21.86■■□□□ 1.09
USP39-203ENST00000409470 XYLT1Q86Y38 959 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 LRRC52Q8N7C0 313 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 NIPA2Q8N8Q9 360 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 DCLK3Q9C098 648 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 ARHGAP39Q9C0H5 1083 aa21.86■■□□□ 1.09
USP39-203ENST00000409470 PI4K2BG5E9Z4 385 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 GPD2P43304 727 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 NFX1Q12986 1120 aaKnown RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 ZNF268Q14587 947 aaPredicted RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 JOSD2Q8TAC2 188 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 MRPL45Q9BRJ2 306 aaKnown RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 MTG1Q9BT17 334 aaPredicted RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 METTL5Q9NRN9 209 aaKnown RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 HOMER3Q9NSC5 361 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 GRHL1Q9NZI5 618 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 HOXC8P31273 242 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 LMAN1P49257 510 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 KRT17Q04695 432 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 KLF1Q13351 362 aaPredicted RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 UAP1Q16222 522 aaPredicted RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 C9orf57Q5W0N0 161 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 TAF2Q6P1X5 1199 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 LCLAT1Q6UWP7 414 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 FAM76AQ8TAV0 307 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 FBXO25Q8TCJ0 367 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 IPO4Q8TEX9 1081 aaKnown RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 GRK7Q8WTQ7 553 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 SLCO2A1Q92959 643 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 ARL8AQ96BM9 186 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 TSPAN16Q9UKR8 245 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 R3HDM2Q9Y2K5 976 aaKnown RBP21.85■■□□□ 1.09
USP39-203ENST00000409470 SCN1AP35498 2009 aa21.85■■□□□ 1.09
USP39-203ENST00000409470 CD4P01730 458 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 CYBAP13498 195 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 GSCP56915 257 aaPredicted RBP21.84■■□□□ 1.09
USP39-203ENST00000409470 GJA9P57773 515 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 UBXN11Q5T124 520 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 ZDHHC24Q6UX98 284 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 LRIG3Q6UXM1 1119 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 C12orf29Q8N999 325 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 TRIB2Q92519 343 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 CCDC114Q96M63 670 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 RNF39Q9H2S5 420 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 SPC25Q9HBM1 224 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 PSD3Q9NYI0 1048 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 FEZ2Q9UHY8 353 aaPredicted RBP21.84■■□□□ 1.09
USP39-203ENST00000409470 GABRQQ9UN88 632 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 ATP8A1Q9Y2Q0 1164 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 SMIM28A0A1B0GU29 152 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 M0QZ92 97 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 XPOTO43592 962 aaKnown RBP21.84■■□□□ 1.09
USP39-203ENST00000409470 PGK1P00558 417 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 GABRB2P47870 512 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 STILQ15468 1287 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 TTMPQ5BVD1 217 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 KAZNQ674X7 775 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 CXCL17Q6UXB2 119 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 ANKS1BQ7Z6G8 1248 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 SESTD1Q86VW0 696 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 SLITRK1Q96PX8 696 aa21.84■■□□□ 1.09
USP39-203ENST00000409470 DDX56Q9NY93 547 aaKnown RBP21.84■■□□□ 1.09
USP39-203ENST00000409470 MTRF1LQ9UGC7 380 aaKnown RBP21.84■■□□□ 1.09
USP39-203ENST00000409470 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 CYP3A5P20815 502 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 GOLGA7BQ2TAP0 167 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms