RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ELF2Q15723 593 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 ERCC6LQ2NKX8 1250 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 WSCD1Q658N2 575 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 RSRC2Q7L4I2 434 aaKnown RBP14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CTAGE6Q86UF2 777 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 ERICH1Q86X53 443 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CTAGE4Q8IX94 777 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 UBA3Q8TBC4 463 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 SEPT8Q92599 483 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 MS4A14Q96JA4 679 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 SENP8Q96LD8 212 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 CPXM1Q96SM3 734 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 SCINQ9Y6U3 715 aa14.9□□□□□ -0.02
GPNMB-203ENST00000409458 DCDC2CA8MYV0 355 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 DYNC1I1O14576 645 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 B4GALT3O60512 393 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 ERBB2P04626 1255 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 PFKMP08237 780 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 GJA8P48165 433 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 AARSP49588 968 aaKnown RBP eCLIP14.89□□□□□ -0.03
GPNMB-203ENST00000409458 STILQ15468 1287 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 TEX35Q5T0J7 233 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 C1orf53Q5VUE5 145 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 ARHGAP17Q68EM7 881 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 GLB1LQ6UWU2 654 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 CD300LGQ6UXG3 332 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 GOLGA1Q92805 767 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 TOX2Q96NM4 488 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 MRPL47Q9HD33 250 aaKnown RBP14.89□□□□□ -0.03
GPNMB-203ENST00000409458 PARVAQ9NVD7 372 aa14.89□□□□□ -0.03
GPNMB-203ENST00000409458 ENPP3O14638 875 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 CCDC130P13994 396 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 PSMC1P62191 440 aaKnown RBP14.88□□□□□ -0.03
GPNMB-203ENST00000409458 PKN2Q16513 984 aaKnown RBP14.88□□□□□ -0.03
GPNMB-203ENST00000409458 PAN2Q504Q3 1202 aaKnown RBP14.88□□□□□ -0.03
GPNMB-203ENST00000409458 PKDCCQ504Y2 493 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 TIGD5Q53EQ6 642 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 DCAF12L1Q5VU92 463 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 DNAJC24Q6P3W2 148 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 DSTYKQ6XUX3 929 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 ZNF572Q7Z3I7 529 aaPredicted RBP14.88□□□□□ -0.03
GPNMB-203ENST00000409458 CRYBG2Q8N1P7 616 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 APBB2Q92870 758 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 CD101Q93033 1021 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 TMEM161AQ9NX61 479 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 ATP11BQ9Y2G3 1177 aa14.88□□□□□ -0.03
GPNMB-203ENST00000409458 CES2O00748 559 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 GABRDO14764 452 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 B3GAT3O94766 335 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 CXCL10P02778 98 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 ACAT1P24752 427 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 CYP2C18P33260 490 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 GSCP56915 257 aaPredicted RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 C2orf54Q08AI8 447 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 CCDC142Q17RM4 750 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 NOMO2Q5JPE7 1267 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 CCDC181Q5TID7 509 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 ZNF280BQ86YH2 543 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 NOA1Q8NC60 698 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 C3orf20Q8ND61 904 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 FEZF2Q8TBJ5 459 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 URGCPQ8TCY9 931 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 UBXN4Q92575 508 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 KRT35Q92764 455 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 DDX27Q96GQ7 796 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 UROC1Q96N76 676 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 TBX21Q9UL17 535 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 STRIP2Q9ULQ0 834 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 TIMM13Q9Y5L4 95 aaPredicted RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 MICAL3Q7RTP6 2002 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 F8W810 466 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 I3L4J1 428 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 TULP2O00295 520 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 SPOPO43791 374 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 DDHD2O94830 711 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 ITGB1P05556 798 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 FAM163BP0C2L3 166 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 HSPA1AP0DMV8 641 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 HSPA1BP0DMV9 641 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 ADORA2BP29275 332 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 TKTP29401 623 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 BRCC3P46736 316 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 RPL7AP62424 266 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 DSC1Q08554 894 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 KIAA0319Q5VV43 1072 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 XYLT1Q86Y38 959 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 ANKLE1Q8NAG6 615 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 B3GALNT2Q8NCR0 500 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 MSANTD4Q8NCY6 345 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 ALG3Q92685 438 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 C18orf8Q96DM3 657 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 PBKQ96KB5 322 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 MCEEQ96PE7 176 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 C11orf49Q9H6J7 331 aa14.87□□□□□ -0.03
GPNMB-203ENST00000409458 ELAC1Q9H777 363 aaKnown RBP14.87□□□□□ -0.03
GPNMB-203ENST00000409458 TBC1D13Q9NVG8 400 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms