RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 UBQLN1Q9UMX0 589 aaKnown RBP20.45■□□□□ 0.86
LIMS2-204ENST00000409286 PLAAQ9Y263 795 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 CITO14578 2027 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 F8VP50 259 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 KCNJ1P48048 391 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 GJA9P57773 515 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 DHX9Q08211 1270 aaKnown RBP20.45■□□□□ 0.86
LIMS2-204ENST00000409286 UAP1Q16222 522 aaPredicted RBP20.45■□□□□ 0.86
LIMS2-204ENST00000409286 CCNG2Q16589 344 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 XKR4Q5GH76 650 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 TAF2Q6P1X5 1199 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 ATL2Q8NHH9 583 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 FAM76AQ8TAV0 307 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 TMEM40Q8WWA1 233 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 MCRS1Q96EZ8 462 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 CPXM1Q96SM3 734 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 HERPUD2Q9BSE4 406 aa20.45■□□□□ 0.86
LIMS2-204ENST00000409286 PIN4Q9Y237 131 aaKnown RBP20.45■□□□□ 0.86
LIMS2-204ENST00000409286 M0QYV0 167 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 XPOTO43592 962 aaKnown RBP20.44■□□□□ 0.86
LIMS2-204ENST00000409286 RECQL4O94761 1208 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 CD4P01730 458 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 CTGFP29279 349 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 PTPN7P35236 360 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 RPL21P46778 160 aaKnown RBP20.44■□□□□ 0.86
LIMS2-204ENST00000409286 PLTPP55058 493 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 FCGRTP55899 365 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 NFX1Q12986 1120 aaKnown RBP20.44■□□□□ 0.86
LIMS2-204ENST00000409286 UBXN11Q5T124 520 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 MFSD14CQ5VZR4 134 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 POLNQ7Z5Q5 900 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 TRPV1Q8NER1 839 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 MTG1Q9BT17 334 aaPredicted RBP20.44■□□□□ 0.86
LIMS2-204ENST00000409286 CXCL16Q9H2A7 254 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 NXF3Q9H4D5 531 aaKnown RBP20.44■□□□□ 0.86
LIMS2-204ENST00000409286 CHST7Q9NS84 486 aa20.44■□□□□ 0.86
LIMS2-204ENST00000409286 MTRF1LQ9UGC7 380 aaKnown RBP20.44■□□□□ 0.86
LIMS2-204ENST00000409286 H0YGN5 161 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 GOLGA8SH3BPF8 625 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 KCNE1P15382 129 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 PSMA2P25787 234 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 RFC1P35251 1148 aaPredicted RBP20.43■□□□□ 0.86
LIMS2-204ENST00000409286 PDCLQ13371 301 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 PPP1R7Q15435 360 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 C9orf57Q5W0N0 161 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 ART4Q93070 314 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 ARL8AQ96BM9 186 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 SLITRK1Q96PX8 696 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 HEMGNQ9BXL5 484 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 TUBGCP4Q9UGJ1 667 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 HES2Q9Y543 173 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 NFS1Q9Y697 457 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 RALGAPA2Q2PPJ7 1873 aa20.43■□□□□ 0.86
LIMS2-204ENST00000409286 KRT1P04264 644 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 ERBB2P04626 1255 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 GJC1P36383 396 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 PTK6Q13882 451 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 ACAP1Q15027 740 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 LLGL1Q15334 1064 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 TTMPQ5BVD1 217 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 UNC93AQ86WB7 457 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 IPO4Q8TEX9 1081 aaKnown RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 C18orf25Q96B23 403 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 RNF25Q96BH1 459 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 HHIPL1Q96JK4 782 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 UPF3AQ9H1J1 476 aaKnown RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 WHRNQ9P202 907 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 PTPN22Q9Y2R2 807 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 SNX9Q9Y5X1 595 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 SMIM28A0A1B0GU29 152 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 GAS8O95995 478 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 C6orf222P0C671 652 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 CYBAP13498 195 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 CYP3A5P20815 502 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 KRT17Q04695 432 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 SNX1Q13596 522 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 JOSD2Q8TAC2 188 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 FBXO25Q8TCJ0 367 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 UBLCP1Q8WVY7 318 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 MRPL45Q9BRJ2 306 aaKnown RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 TJP2Q9UDY2 1190 aa20.42■□□□□ 0.86
LIMS2-204ENST00000409286 R3HDM2Q9Y2K5 976 aaKnown RBP20.42■□□□□ 0.86
LIMS2-204ENST00000409286 PIRO00625 290 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 PPEF2O14830 753 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 TJP3O95049 919 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 KRT14P02533 472 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 KRT7P08729 469 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 SETSIPP0DME0 302 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 TCF4P15884 667 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 ITIH2P19823 946 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 AKAP5P24588 427 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 PNPLA4P41247 253 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 NKX3-2P78367 333 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 HADHQ16836 314 aaKnown RBP20.41■□□□□ 0.86
LIMS2-204ENST00000409286 ATP13A4Q4VNC1 1196 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 ODF2Q5BJF6 829 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 SPOCD1Q6ZMY3 1216 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 UBA3Q8TBC4 463 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 TSPAN16Q9UKR8 245 aa20.41■□□□□ 0.86
LIMS2-204ENST00000409286 GOLGA6L10A6NI86 522 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms