RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PKMYT1Q99640 499 aa19.19■□□□□ 0.66
PDLIM2-206ENST00000409141 STX10O60499 249 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 P4HA1P13674 534 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 GTF2H1P32780 548 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 CCR2P41597 374 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 MCCD1P59942 119 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 PSMC1P62191 440 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 SIGLEC14Q08ET2 396 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 VEPH1Q14D04 833 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 TAF12Q16514 161 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 PRSS36Q5K4E3 855 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 FAM171BQ6P995 826 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 SPATA2LQ8IUW3 424 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 ZC3H3Q8IXZ2 948 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 TRIML1Q8N9V2 468 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 ST13P5Q8NFI4 369 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 NELFBQ8WX92 580 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 PSMG2Q969U7 264 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 LPIN3Q9BQK8 851 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 LRFN3Q9BTN0 628 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 SMOC2Q9H3U7 446 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 LMBRD1Q9NUN5 540 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 GDE1Q9NZC3 331 aa19.18■□□□□ 0.66
PDLIM2-206ENST00000409141 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 NOTCH4Q99466 2003 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 A8MXQ7 604 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 ANHXE9PGG2 379 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 MICAL2O94851 1124 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 CEBPBP17676 345 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 ATF6P18850 670 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 CYP2F1P24903 491 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 EPHA5P54756 1037 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 MAPRE1Q15691 268 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 CCDC142Q17RM4 750 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 TCERG1LQ5VWI1 586 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 SCARA5Q6ZMJ2 495 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 C4orf50Q6ZRC1 276 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 SLC44A3Q8N4M1 653 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 TAS1R2Q8TE23 839 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 GIPC2Q8TF65 315 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 IMPG2Q9BZV3 1241 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 CLSTN2Q9H4D0 955 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 SMYD3Q9H7B4 428 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 TMEM8AQ9HCN3 771 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 ABCB6Q9NP58 842 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 CRTAC1Q9NQ79 661 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 MAGEC2Q9UBF1 373 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 CTNND2Q9UQB3 1225 aa19.17■□□□□ 0.66
PDLIM2-206ENST00000409141 BICDL2A1A5D9 508 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 ASS1P00966 412 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 RAP1GAPP47736 663 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 CDH8P55286 799 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 HTR4Q13639 388 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 KRT39Q6A163 491 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 PARM1Q6UWI2 310 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 GPR152Q8TDT2 470 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 CEP63Q96MT8 703 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 DUSP9Q99956 384 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 LRRC3Q9BY71 257 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 ARMCX3Q9UH62 379 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 NUMBLQ9Y6R0 609 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 TMEM221A6NGB7 291 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 PRR33A8MZF0 331 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 M0R296 226 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 GJA1P17302 382 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 PTPN1P18031 435 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 STX17P56962 302 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 RPL10AP62906 217 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 CYP27A1Q02318 531 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 DDR2Q16832 855 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 CFAP221Q4G0U5 840 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 DCAF17Q5H9S7 520 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 MDH1BQ5I0G3 518 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 SPOPLQ6IQ16 392 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 TTI2Q6NXR4 508 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 MTSS1LQ765P7 747 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 FILIP1Q7Z7B0 1213 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 TMC8Q8IU68 726 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 CCDC150Q8NCX0 1101 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 MYCBPAPQ8TBZ2 947 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 FGF14Q92915 247 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 FUBP3Q96I24 572 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 NME7Q9Y5B8 376 aa19.16■□□□□ 0.66
PDLIM2-206ENST00000409141 A0A1W2PRU2 124 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 NRG2O14511 850 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 MOSPD3O75425 235 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 FGF19O95750 216 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 GPR15P49685 360 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 MXI1P50539 228 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 PAK1Q13153 545 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 SDHAF4Q5VUM1 108 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 SCN4BQ8IWT1 228 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 SHKBP1Q8TBC3 707 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 MYLPFQ96A32 169 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 RPP25Q9BUL9 199 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 DPEP3Q9H4B8 488 aa19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 METTL14Q9HCE5 456 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 ZNF334Q9HCZ1 680 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-206ENST00000409141 TECTAO75443 2155 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms