RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ZDHHC18Q9NUE0 388 aa26.06■■□□□ 1.76
DNMT3A-206ENST00000406659 UBQLN1Q9UMX0 589 aaKnown RBP26.06■■□□□ 1.76
DNMT3A-206ENST00000406659 PLAAQ9Y263 795 aa26.06■■□□□ 1.76
DNMT3A-206ENST00000406659 SNX9Q9Y5X1 595 aa26.06■■□□□ 1.76
DNMT3A-206ENST00000406659 GOLGA6CA6NDK9 693 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 GOLGA6DP0CG33 693 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 ATF7P17544 494 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 HOXC8P31273 242 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 RPL21P46778 160 aaKnown RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 PLTPP55058 493 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 DHX9Q08211 1270 aaKnown RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 ODF2Q5BJF6 829 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 GNASQ5JWF2 1037 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 GLRA4Q5JXX5 417 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 TMC3Q7Z5M5 1100 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 XYLT1Q86Y38 959 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 RNF25Q96BH1 459 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 HERPUD2Q9BSE4 406 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 MTG1Q9BT17 334 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 GOLGA6AQ9NYA3 693 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 TJP2Q9UDY2 1190 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 MYADML2A6NDP7 307 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 PPEF2O14830 753 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 KRT1P04264 644 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 ERBB2P04626 1255 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 PSMA2P25787 234 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 RFC1P35251 1148 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 PSMC4P43686 418 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 GSCP56915 257 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 LRIG3Q6UXM1 1119 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 UBA3Q8TBC4 463 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 GRK7Q8WTQ7 553 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 UBLCP1Q8WVY7 318 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 SLCO2A1Q92959 643 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 CHST7Q9NS84 486 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 PSD3Q9NYI0 1048 aa26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 FEZ2Q9UHY8 353 aaPredicted RBP26.05■■□□□ 1.76
DNMT3A-206ENST00000406659 GPD2P43304 727 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 GABRB2P47870 512 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 GJA9P57773 515 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 NFX1Q12986 1120 aaKnown RBP26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 PDCLQ13371 301 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 STILQ15468 1287 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 C9orf57Q5W0N0 161 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 TAF2Q6P1X5 1199 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 LCLAT1Q6UWP7 414 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 ATG4AQ8WYN0 398 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 TSPAN18Q96SJ8 248 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 DDX56Q9NY93 547 aaKnown RBP26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 GRHL1Q9NZI5 618 aa26.04■■□□□ 1.76
DNMT3A-206ENST00000406659 DCAF8L1A6NGE4 600 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 XPOTO43592 962 aaKnown RBP26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 CD4P01730 458 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 CYBAP13498 195 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 TCF4P15884 667 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 KLF1Q13351 362 aaPredicted RBP26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 ATP13A4Q4VNC1 1196 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 UBXN11Q5T124 520 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 SYDE1Q6ZW31 735 aaPredicted RBP26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 JOSD2Q8TAC2 188 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 FAM76AQ8TAV0 307 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 ZIC5Q96T25 663 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 MRPL45Q9BRJ2 306 aaKnown RBP26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 SPC25Q9HBM1 224 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 KLHL11Q9NVR0 708 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 KLK14Q9P0G3 267 aa26.03■■□□□ 1.76
DNMT3A-206ENST00000406659 PI4K2BG5E9Z4 385 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 UAP1Q16222 522 aaPredicted RBP26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 ZDHHC24Q6UX98 284 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 IPO4Q8TEX9 1081 aaKnown RBP26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 ARL8AQ96BM9 186 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 SLITRK1Q96PX8 696 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 ARHGAP39Q9C0H5 1083 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 METTL5Q9NRN9 209 aaKnown RBP26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 RNF19AQ9NV58 838 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 MTRF1LQ9UGC7 380 aaKnown RBP26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 R3HDM2Q9Y2K5 976 aaKnown RBP26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 SMIM28A0A1B0GU29 152 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 M0QZ92 97 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 PPFIA2O75334 1257 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 KRT14P02533 472 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 COPS2P61201 443 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 KRT17Q04695 432 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 CCNG2Q16589 344 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 ATL2Q8NHH9 583 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 FNIP1Q8TF40 1166 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 MCRS1Q96EZ8 462 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 MIS12Q9H081 205 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 TSPAN16Q9UKR8 245 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 GABRQQ9UN88 632 aa26.02■■□□□ 1.76
DNMT3A-206ENST00000406659 CYP3A5P20815 502 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 LMAN1P49257 510 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 GOLGA7BQ2TAP0 167 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 PAXIP1Q6ZW49 1069 aaPredicted RBP26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 FBXO25Q8TCJ0 367 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 TRIB2Q92519 343 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 FAM129AQ9BZQ8 928 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 RNF39Q9H2S5 420 aa26.01■■□□□ 1.75
DNMT3A-206ENST00000406659 ATP8A1Q9Y2Q0 1164 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms