RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 ZMYM5Q9UJ78 669 aa22.74■■□□□ 1.23
RHBDD3-202ENST00000406335 MAGED2Q9UNF1 606 aaPredicted RBP22.74■■□□□ 1.23
RHBDD3-202ENST00000406335 CCDC163A0A0D9SF12 145 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 MYMKA6NI61 221 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 SPTLC2O15270 562 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 TRAK2O60296 914 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 TBCAO75347 108 aaKnown RBP22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 F13A1P00488 732 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 ATF6P18850 670 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 PSMD2Q13200 908 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 TMEM196Q5HYL7 178 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 RNF43Q68DV7 783 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 FSTL4Q6MZW2 842 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 DCP1BQ8IZD4 617 aaKnown RBP22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 CAMKK1Q8N5S9 505 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 C2orf15Q8WU43 125 aaKnown RBP22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 KCNN1Q92952 543 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 VPS45Q9NRW7 570 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 PCDHGA5Q9Y5G8 931 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 SCN1AP35498 2009 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 F5P12259 2224 aa22.73■■□□□ 1.23
RHBDD3-202ENST00000406335 COL4A2P08572 1712 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 RNF40O75150 1001 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 NFICP08651 508 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 PMLP29590 882 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 MPLP40238 635 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 RAP1GAPP47736 663 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 SMARCB1Q12824 385 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 ELF2Q15723 593 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 SPPL2BQ8TCT7 592 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 MRPS31Q92665 395 aaKnown RBP22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 HHIPQ96QV1 700 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 IL21Q9HBE4 155 aa22.72■■□□□ 1.23
RHBDD3-202ENST00000406335 PIRO00625 290 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 TRDMT1O14717 391 aaKnown RBP22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 RHOBTB1O94844 696 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 EGFP01133 1207 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 CYP11A1P05108 521 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 HAPLN1P10915 354 aaPredicted RBP22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 DDX6P26196 483 aaKnown RBP eCLIP22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 TAF6P49848 677 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 GALK1P51570 392 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 SV2BQ7L1I2 683 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 SFR1Q86XK3 245 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 PDILTQ8N807 584 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 DNAJC19Q96DA6 116 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 FAM83CQ9BQN1 747 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 TDP1Q9NUW8 608 aa22.71■■□□□ 1.23
RHBDD3-202ENST00000406335 PPP6R2O75170 966 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 PRPF40AO75400 957 aaKnown RBP22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 AKAP3O75969 853 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 KCNK5O95279 499 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 YEATS4O95619 227 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 DRD1P21728 446 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 SCP2P22307 547 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 GBP1P32455 592 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 STAT6P42226 847 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 ACOT2P49753 483 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 GTF2BQ00403 316 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 CREB5Q02930 508 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 ZC2HC1CQ53FD0 456 aaPredicted RBP22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 TXNDC8Q6A555 127 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 ADALQ6DHV7 355 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 SLC39A4Q6P5W5 647 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 CCDC73Q6ZRK6 1079 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 USP13Q92995 863 aaPredicted RBP22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 P2RY13Q9BPV8 354 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 KIF9Q9HAQ2 790 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 HPS4Q9NQG7 708 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 POLR3BQ9NW08 1133 aaPredicted RBP22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 DPP3Q9NY33 737 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 CPSF3Q9UKF6 684 aaKnown RBP22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 CCL26Q9Y258 94 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 DERAQ9Y315 318 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 PCDHB5Q9Y5E4 795 aa22.7■■□□□ 1.22
RHBDD3-202ENST00000406335 SPTBN2O15020 2390 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 A0A0B4J269 797 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 PIGRP01833 764 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 ARSAP15289 507 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 NLRP12P59046 1061 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 TSPY1Q01534 308 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 WSCD1Q658N2 575 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 PSAPL1Q6NUJ1 521 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 PI4K2AQ9BTU6 479 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 LSM14BQ9BX40 385 aaKnown RBP22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 ASB7Q9H672 318 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 TRPC7Q9HCX4 862 aa22.69■■□□□ 1.22
RHBDD3-202ENST00000406335 TM4SF5O14894 197 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 ADRB2P07550 413 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 PDIA4P13667 645 aaKnown RBP22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 PDGFRLQ15198 375 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 PLK5Q496M5 336 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 FBXO43Q4G163 708 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 LRRTM3Q86VH5 581 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 CPA6Q8N4T0 437 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 RPLP0P6Q8NHW5 317 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 ZC3H10Q96K80 434 aaKnown RBP22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 EDEM2Q9BV94 578 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 IKZF4Q9H2S9 585 aa22.68■■□□□ 1.22
RHBDD3-202ENST00000406335 TBC1D7Q9P0N9 293 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms