RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 SNX17Q15036 470 aa18.2■□□□□ 0.5
LSP1-203ENST00000405957 AGBL2Q5U5Z8 902 aa18.2■□□□□ 0.5
LSP1-203ENST00000405957 TTC27Q6P3X3 843 aa18.2■□□□□ 0.5
LSP1-203ENST00000405957 HOOK3Q86VS8 718 aa18.2■□□□□ 0.5
LSP1-203ENST00000405957 PPP1R13LQ8WUF5 828 aa18.2■□□□□ 0.5
LSP1-203ENST00000405957 RBM41Q96IZ5 413 aaKnown RBP18.2■□□□□ 0.5
LSP1-203ENST00000405957 SNX27Q96L92 541 aa18.2■□□□□ 0.5
LSP1-203ENST00000405957 UPF3AQ9H1J1 476 aaKnown RBP18.2■□□□□ 0.5
LSP1-203ENST00000405957 WHRNQ9P202 907 aa18.2■□□□□ 0.5
LSP1-203ENST00000405957 NUDT17P0C025 328 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 PRKAR2AP13861 404 aaKnown RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 RBP5P82980 135 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 CAV1Q03135 178 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 PIGHQ14442 188 aaPredicted RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 PPP1R7Q15435 360 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 DNAJC24Q6P3W2 148 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 ZDHHC14Q8IZN3 488 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 NME8Q8N427 588 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 C7orf31Q8N865 590 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 ZBTB9Q96C00 473 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 KIF12Q96FN5 646 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 HPDLQ96IR7 371 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 SDCBP2Q9H190 292 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 PABPC3Q9H361 631 aaKnown RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 DPP3Q9NY33 737 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 GRHL1Q9NZI5 618 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 PTCH2Q9Y6C5 1203 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 TMEM191CA6NGB0 347 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 C6orf222P0C671 652 aaPredicted RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 HSPA8P11142 646 aaKnown RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 NR1D1P20393 614 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 RAP1GAPP47736 663 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 CRYBB1P53674 252 aaPredicted RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 YARSP54577 528 aaKnown RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 PLTPP55058 493 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 COPS2P61201 443 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 LMNB2Q03252 620 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 ZNF844Q08AG5 666 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 ZNF394Q53GI3 561 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 TAF2Q6P1X5 1199 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 ZDHHC24Q6UX98 284 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 NIPA2Q8N8Q9 360 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 C3orf20Q8ND61 904 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 MTG1Q9BT17 334 aaPredicted RBP18.19■□□□□ 0.5
LSP1-203ENST00000405957 SMYD3Q9H7B4 428 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 AGAP1Q9UPQ3 857 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 SNX24Q9Y343 169 aa18.19■□□□□ 0.5
LSP1-203ENST00000405957 MYADML2A6NDP7 307 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 SRRM3A6NNA2 597 aaPredicted RBP18.18■□□□□ 0.5
LSP1-203ENST00000405957 SSTR3P32745 418 aaPredicted RBP18.18■□□□□ 0.5
LSP1-203ENST00000405957 RPL21P46778 160 aaKnown RBP18.18■□□□□ 0.5
LSP1-203ENST00000405957 PMS2P54278 862 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 GSCP56915 257 aaPredicted RBP18.18■□□□□ 0.5
LSP1-203ENST00000405957 NKX3-2P78367 333 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 ERICH1Q86X53 443 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 CPNE8Q86YQ8 564 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 RCOR2Q8IZ40 523 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 BBOF1Q8ND07 529 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 SLAIN1Q8ND83 568 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 FBXO25Q8TCJ0 367 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 TFAP2BQ92481 460 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 ART4Q93070 314 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 EIF2AQ9BY44 585 aaKnown RBP18.18■□□□□ 0.5
LSP1-203ENST00000405957 TRIM7Q9C029 511 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 SNTG2Q9NY99 539 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 WDR35Q9P2L0 1181 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 ATP8A1Q9Y2Q0 1164 aa18.18■□□□□ 0.5
LSP1-203ENST00000405957 CILPO75339 1184 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
LSP1-203ENST00000405957 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
LSP1-203ENST00000405957 ITIH2P19823 946 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 CCND3P30281 292 aaPredicted RBP18.17■□□□□ 0.5
LSP1-203ENST00000405957 GRK4P32298 578 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 FLT3P36888 993 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 RAD23BP54727 409 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 ZNF200P98182 395 aaPredicted RBP18.17■□□□□ 0.5
LSP1-203ENST00000405957 IFFO1Q0D2I5 559 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 KLF1Q13351 362 aaPredicted RBP18.17■□□□□ 0.5
LSP1-203ENST00000405957 PTK6Q13882 451 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 CCNG2Q16589 344 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 DENND2CQ68D51 928 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 DCUN1D2Q6PH85 259 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 CCDC50Q8IVM0 306 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 ATL2Q8NHH9 583 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 TMEM40Q8WWA1 233 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 TRIM6Q9C030 488 aaPredicted RBP18.17■□□□□ 0.5
LSP1-203ENST00000405957 DDX56Q9NY93 547 aaKnown RBP18.17■□□□□ 0.5
LSP1-203ENST00000405957 CNTN3Q9P232 1028 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 PTPN22Q9Y2R2 807 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 TCRBV5S1A1TA0A578 114 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 TCRBV7S2A1N4TA0A589 114 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 EIF3HO15372 352 aaKnown RBP eCLIP18.17■□□□□ 0.5
LSP1-203ENST00000405957 PTPN7P35236 360 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 IRAK1P51617 712 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 CDR1P51861 262 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 C2CD6Q53TS8 623 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 MAP3K21Q5TCX8 1036 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 LLGL2Q6P1M3 1020 aa18.17■□□□□ 0.5
LSP1-203ENST00000405957 CEP128Q6ZU80 1094 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms