RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 PFKMP08237 780 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 CTSHP09668 335 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 RARAP10276 462 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 HOXD10P28358 340 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 PNPLA4P41247 253 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 GABRB2P47870 512 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 PIGHQ14442 188 aaPredicted RBP17.18■□□□□ 0.34
PARVB-203ENST00000404989 CYP1B1Q16678 543 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 HSP90B2PQ58FF3 399 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 DCUN1D2Q6PH85 259 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 SND1Q7KZF4 910 aaKnown RBP eCLIP17.18■□□□□ 0.34
PARVB-203ENST00000404989 XYLT1Q86Y38 959 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 HACE1Q8IYU2 909 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 UBA3Q8TBC4 463 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 ZNF560Q96MR9 790 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 GDAP1L1Q96MZ0 367 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 MCEEQ96PE7 176 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
PARVB-203ENST00000404989 MED4Q9NPJ6 270 aa17.18■□□□□ 0.34
PARVB-203ENST00000404989 DDX20Q9UHI6 824 aaKnown RBP17.18■□□□□ 0.34
PARVB-203ENST00000404989 SIGLEC16A6NMB1 481 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 M0QYV0 167 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 TTI1O43156 1089 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 GBP1P32455 592 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 PTGIRP43119 386 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 ZNF268Q14587 947 aaPredicted RBP17.17■□□□□ 0.34
PARVB-203ENST00000404989 PTGISQ16647 500 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 KCTD19Q17RG1 926 aaPredicted RBP17.17■□□□□ 0.34
PARVB-203ENST00000404989 C12orf29Q8N999 325 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
PARVB-203ENST00000404989 IFT81Q8WYA0 676 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 SEC14L1Q92503 715 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 C18orf8Q96DM3 657 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 PPP1R10Q96QC0 940 aaKnown RBP17.17■□□□□ 0.34
PARVB-203ENST00000404989 HERPUD2Q9BSE4 406 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 GOLGA2P5Q9HBQ8 144 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 CHST12Q9NRB3 414 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 GDAP2Q9NXN4 497 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 NFU1Q9UMS0 254 aa17.17■□□□□ 0.34
PARVB-203ENST00000404989 MEIS3P2A8K0S8 358 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 MYCNP04198 464 aaPredicted RBP17.16■□□□□ 0.34
PARVB-203ENST00000404989 FAM153BP0C7A2 387 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 FGFR1P11362 822 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 TCF4P15884 667 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 ECHS1P30084 290 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 LRPAP1P30533 357 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 DR1Q01658 176 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 NFX1Q12986 1120 aaKnown RBP17.16■□□□□ 0.34
PARVB-203ENST00000404989 TRIM71Q2Q1W2 868 aaKnown RBP17.16■□□□□ 0.34
PARVB-203ENST00000404989 FAM153CQ494X1 144 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 PKDCCQ504Y2 493 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 FBXO47Q5MNV8 452 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 LRRC38Q5VT99 294 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 TTC27Q6P3X3 843 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 ACOT1Q86TX2 421 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 UNC93AQ86WB7 457 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 KATNAL2Q8IYT4 538 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 NIPA2Q8N8Q9 360 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 GSTCDQ8NEC7 633 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 JOSD2Q8TAC2 188 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 KBTBD7Q8WVZ9 684 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
PARVB-203ENST00000404989 MCRS1Q96EZ8 462 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 HOMER3Q9NSC5 361 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 FAM105AQ9NUU6 356 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 PCYOX1Q9UHG3 505 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 FAM153AQ9UHL3 310 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 HPCAL4Q9UM19 191 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 USTQ9Y2C2 406 aa17.16■□□□□ 0.34
PARVB-203ENST00000404989 KPNA7A9QM74 516 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 F8VP50 259 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 GOLGA8SH3BPF8 625 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 PODXLO00592 558 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 HCRTO43612 131 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 CAPN15O75808 1086 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 RFC1P35251 1148 aaPredicted RBP17.15■□□□□ 0.34
PARVB-203ENST00000404989 FNTAP49354 379 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 AARSP49588 968 aaKnown RBP eCLIP17.15■□□□□ 0.34
PARVB-203ENST00000404989 APLP1P51693 650 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 SNX16P57768 344 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 PSMC1P62191 440 aaKnown RBP17.15■□□□□ 0.34
PARVB-203ENST00000404989 FAM193AP78312 1265 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 GABPB1Q06547 395 aaPredicted RBP17.15■□□□□ 0.34
PARVB-203ENST00000404989 PDCLQ13371 301 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 PPP1R26Q5T8A7 1209 aaPredicted RBP17.15■□□□□ 0.34
PARVB-203ENST00000404989 ALS2CLQ60I27 953 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 ANKS1BQ7Z6G8 1248 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
PARVB-203ENST00000404989 MREGQ8N565 214 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 C12orf50Q8NA57 414 aaPredicted RBP17.15■□□□□ 0.34
PARVB-203ENST00000404989 IPO4Q8TEX9 1081 aaKnown RBP17.15■□□□□ 0.34
PARVB-203ENST00000404989 FNIP1Q8TF40 1166 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 LPIN3Q9BQK8 851 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 TSPAN16Q9UKR8 245 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 SETSIPP0DME0 302 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 THPOP40225 353 aa17.15■□□□□ 0.34
PARVB-203ENST00000404989 TAF6P49848 677 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms