RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CRELD2Q6UXH1 353 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 FUKQ8N0W3 1084 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 ACTL9Q8TC94 416 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 CENPTQ96BT3 561 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 ADPGKQ9BRR6 497 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 APOL6Q9BWW8 343 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 TXLNGYQ9BZA5 131 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 HAPLN2Q9GZV7 340 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 DHX33Q9H6R0 707 aaKnown RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 DCTN4Q9UJW0 460 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 MYH9P35579 1960 aaKnown RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 MCF2LO15068 1137 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 MED7O43513 233 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 CYP1A1P04798 512 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 ITGB3P05106 788 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 SSTR1P30872 391 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 PHBP35232 272 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 MSH2P43246 934 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 YARSP54577 528 aaKnown RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 TGFB2P61812 414 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 OTUD4Q01804 1114 aaKnown RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 PIGHQ14442 188 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 SPARCL1Q14515 664 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 FASTKD3Q14CZ7 662 aaKnown RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 PKN2Q16513 984 aaKnown RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 PPP6R3Q5H9R7 873 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 IER5Q5VY09 327 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 C1orf228Q6PIY5 440 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 C3orf62Q6ZUJ4 267 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 BRSK2Q8IWQ3 736 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 FBXO16Q8IX29 292 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 KATNAL2Q8IYT4 538 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 CCHCR1Q8TD31 782 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 ATXN2LQ8WWM7 1075 aaKnown RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 KLRG1Q96E93 195 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 NFASCO94856 1347 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 COL2A1P02458 1487 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 GREB1LQ9C091 1923 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 FAM47DPA6NHR8 397 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 SRRM3A6NNA2 597 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 F5H423 210 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 ASAP2O43150 1006 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 SNX3O60493 162 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 OAZ1P54368 228 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 CDH6P55285 790 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 RTP1P59025 263 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 MXD4Q14582 209 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-201ENST00000401921 SURF1Q15526 300 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 BSPRYQ5W0U4 402 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 EEF1DP3Q658K8 133 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 DENND1BQ6P3S1 775 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 C6orf89Q6UWU4 347 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 PDIK1LQ8N165 341 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 FAM71DQ8N9W8 422 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 NLRP7Q8WX94 980 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 VCPIP1Q96JH7 1222 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 FAM167AQ96KS9 214 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 SLITRK1Q96PX8 696 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 VPS33BQ9H267 617 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 AAASQ9NRG9 546 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 AGAP1Q9UPQ3 857 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 ARL2BPQ9Y2Y0 163 aa8.09□□□□□ -1.11
HDAC9-201ENST00000401921 EME2A4GXA9 379 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 DNALI1O14645 258 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 KRT7P08729 469 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 PAEPP09466 180 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 RBP3P10745 1247 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 ACO1P21399 889 aaKnown RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 MMP8P22894 467 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 CTCFP49711 727 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 ARL4CP56559 192 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 EIF3EP60228 445 aaKnown RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 SMAD1Q15797 465 aaKnown RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 GJC2Q5T442 439 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 PLEKHA7Q6IQ23 1121 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 PPP1R2P3Q6NXS1 205 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 SESTD1Q86VW0 696 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 PHF13Q86YI8 300 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 WDR49Q8IV35 697 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM130Q8N3G9 435 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 CCDC33Q8N5R6 958 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 DNERQ8NFT8 737 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 CCT6BQ92526 530 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 ZNF317Q96PQ6 595 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 SPATC1LQ9H0A9 340 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 ADAM7Q9H2U9 754 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 ETNK1Q9HBU6 452 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 STRIP2Q9ULQ0 834 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 CHMP2BQ9UQN3 213 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 MAD1L1Q9Y6D9 718 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 SYNJ2BP-COX16A0A087WUM0 186 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM191CA6NGB0 347 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 LIASO43766 372 aa8.08□□□□□ -1.12
HDAC9-201ENST00000401921 FARP2O94887 1054 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-201ENST00000401921 SNUPNO95149 360 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms