RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 ASPHQ12797 758 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 STILQ15468 1287 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 DSTYKQ6XUX3 929 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 ZSWIM2Q8NEG5 633 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 NUDCD1Q96RS6 583 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 PAK5Q9P286 719 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 G3BP2Q9UN86 482 aaKnown RBP19.42■□□□□ 0.7
USP48-204ENST00000400301 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 C4BP0C0L5 1744 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 F8VP50 259 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 CXCL8P10145 99 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 PECAM1P16284 738 aaPredicted RBP19.42■□□□□ 0.7
USP48-204ENST00000400301 ERMARDQ5T6L9 678 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 TCRBV7S2A1N4TA0A589 114 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 PEX19P40855 299 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 ATP13A4Q4VNC1 1196 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 FBXO16Q8IX29 292 aaPredicted RBP19.42■□□□□ 0.7
USP48-204ENST00000400301 MAGEB18Q96M61 343 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 STAP1Q9ULZ2 295 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 ZWINTO95229 277 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 NOVP48745 357 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 ZPBP2Q6X784 338 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 FBXO36Q8NEA4 188 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 MFSD14AQ96MC6 490 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 VCX3BQ9H321 246 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 NOD2Q9HC29 1040 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 PHTF1Q9UMS5 762 aa19.42■□□□□ 0.7
USP48-204ENST00000400301 DNALI1O14645 258 aaPredicted RBP19.41■□□□□ 0.7
USP48-204ENST00000400301 FSCN2O14926 492 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 ZFXP17010 805 aaPredicted RBP19.41■□□□□ 0.7
USP48-204ENST00000400301 NME3Q13232 169 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 RIPK3Q9Y572 518 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 ZSCAN5DPP0CG00 497 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 MAMLD1Q13495 774 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 SPATC1LQ9H0A9 340 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 SPECC1L-ADORA2AF8WAN1 911 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 CRCPO75575 148 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 GH1P01241 217 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 ARL13BQ3SXY8 428 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 KATNAL2Q8IYT4 538 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 TRAPPC12Q8WVT3 735 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 BSNDQ8WZ55 320 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 VPS33BQ9H267 617 aa19.41■□□□□ 0.7
USP48-204ENST00000400301 SMAPO00193 183 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 STIP1P31948 543 aaKnown RBP19.4■□□□□ 0.7
USP48-204ENST00000400301 ALDH5A1P51649 535 aaPredicted RBP19.4■□□□□ 0.7
USP48-204ENST00000400301 CDH8P55286 799 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 PTPN11Q06124 597 aaPredicted RBP19.4■□□□□ 0.7
USP48-204ENST00000400301 TAF12Q16514 161 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 GOLGA7BQ2TAP0 167 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 OR5B17Q8NGF7 314 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 HELQQ8TDG4 1101 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 ART4Q93070 314 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 PWWP2AQ96N64 755 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 P2RX7Q99572 595 aaKnown RBP19.4■□□□□ 0.7
USP48-204ENST00000400301 SRRM3A6NNA2 597 aaPredicted RBP19.4■□□□□ 0.7
USP48-204ENST00000400301 GPR162Q16538 588 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 PCDH9Q9HC56 1237 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 DCDC2CA8MYV0 355 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 DIAPH2O60879 1101 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 FSBPO95073 299 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 STAG3L1P0CL83 205 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 RAD23BP54727 409 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 TGFB2P61812 414 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 SSX2IPQ9Y2D8 614 aa19.4■□□□□ 0.7
USP48-204ENST00000400301 OVGP1Q12889 678 aa19.39■□□□□ 0.7
USP48-204ENST00000400301 MAP3K21Q5TCX8 1036 aa19.39■□□□□ 0.7
USP48-204ENST00000400301 PRUNE1Q86TP1 453 aa19.39■□□□□ 0.7
USP48-204ENST00000400301 CLEC4DQ8WXI8 215 aa19.39■□□□□ 0.7
USP48-204ENST00000400301 SRGAP2BP0DMP2 458 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 SKIP12755 728 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 CHKAP35790 457 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 BOLA3Q53S33 107 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 PID1Q7Z2X4 250 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 RSPH3Q86UC2 560 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 STOML1Q9UBI4 398 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 APOBEC2Q9Y235 224 aaKnown RBP19.39■□□□□ 0.69
USP48-204ENST00000400301 ATRNL1Q5VV63 1379 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 TGFB3P10600 412 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 UBA1P22314 1058 aaKnown RBP19.39■□□□□ 0.69
USP48-204ENST00000400301 TMEM132BQ14DG7 1078 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 AGGF1Q8N302 714 aaeCLIP19.39■□□□□ 0.69
USP48-204ENST00000400301 GBP5Q96PP8 586 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 NACA2Q9H009 215 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 MARCOQ9UEW3 520 aaPredicted RBP19.39■□□□□ 0.69
USP48-204ENST00000400301 PIN4Q9Y237 131 aaKnown RBP19.39■□□□□ 0.69
USP48-204ENST00000400301 TULP2O00295 520 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 RWDD4Q6NW29 188 aaKnown RBP19.39■□□□□ 0.69
USP48-204ENST00000400301 METTL23Q86XA0 190 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 CENPTQ96BT3 561 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 LBHD1Q9BQE6 289 aaPredicted RBP19.39■□□□□ 0.69
USP48-204ENST00000400301 TMEM51Q9NW97 253 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 GPATCH2LQ9NWQ4 482 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 USP18Q9UMW8 372 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 POLIQ9UNA4 740 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 SHOC2Q9UQ13 582 aa19.39■□□□□ 0.69
USP48-204ENST00000400301 GSTA1P08263 222 aa19.38■□□□□ 0.69
USP48-204ENST00000400301 MYL3P08590 195 aa19.38■□□□□ 0.69
USP48-204ENST00000400301 NQO1P15559 274 aaKnown RBP19.38■□□□□ 0.69
USP48-204ENST00000400301 NOMO3P69849 1222 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms