RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 ZNF658Q5TYW1 1059 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 RNPC3Q96LT9 517 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 SH3GL1Q99961 368 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 SH3GL3Q99963 347 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 HDAC6Q9UBN7 1215 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 SNAP23O00161 211 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 CHUKO15111 745 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 KPNA6O60684 536 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 SERPING1P05155 500 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ARL3P36405 182 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 CCL23P55773 120 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 RPL10AP62906 217 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 SP3Q02447 781 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 FAPQ12884 760 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 MDH1BQ5I0G3 518 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 LUZP2Q86TE4 346 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 PALB2Q86YC2 1186 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 MARCH10Q8NA82 808 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 SH2D3AQ9BRG2 576 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 MKNK1Q9BUB5 465 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 LNPEPQ9UIQ6 1025 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 VPS28Q9UK41 221 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ABCA9Q8IUA7 1624 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 C3orf70A6NLC5 250 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 APOA5Q6Q788 366 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 POTEEQ6S8J3 1075 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 IP6K2Q9UHH9 426 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 PCDHA13Q9Y5I0 950 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 POTECB2RU33 542 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 NCAM2O15394 837 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 PEX1O43933 1283 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 TRIM16O95361 564 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ACOT2P49753 483 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 NDUFA8P51970 172 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 AP3M2P53677 418 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 CCZ1BP86790 482 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 TAF5Q15542 800 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 LRRC8EQ6NSJ5 796 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 EMBQ6PCB8 327 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 GRAMD1CQ8IYS0 662 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 RPRD1AQ96P16 312 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 AP1M1Q9BXS5 423 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 MRPS26Q9BYN8 205 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 CYTH3O43739 400 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 DEAF1O75398 565 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 SCGNO76038 276 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 FAM200BP0CF97 657 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ARL4CP56559 192 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ACOX1Q15067 660 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 GOLGA7BQ2TAP0 167 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 PRR5LQ6MZQ0 368 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ZNF555Q8NEP9 628 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 SOCS4Q8WXH5 440 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 EML4Q9HC35 981 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 BFARQ9NZS9 450 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 TTC7AQ9ULT0 858 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 H0Y3Z8 333 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 AKR1B1P15121 316 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 NUGGCQ68CJ6 796 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 PLD3Q8IV08 490 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 MSL3Q8N5Y2 521 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 DEPDC7Q96QD5 511 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 TUFT1Q9NNX1 390 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 A0A087X0T9 212 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 PCNAP12004 261 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 BTKQ06187 659 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 SYCP2LQ5T4T6 812 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ARHGEF38Q9NXL2 777 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 GALNT8Q9NY28 637 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ADGRB3O60242 1522 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 CDC42BPGQ6DT37 1551 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 TSPAN3O60637 253 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ACSL3O95573 720 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 KRT75O95678 551 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 FLT3P36888 993 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 SLC7A5Q01650 507 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 USP18Q9UMW8 372 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 POLR1DQ9Y2S0 133 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 DYRK1BQ9Y463 629 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 ENO4A6NNW6 628 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 KRT37O76014 449 aa11.43□□□□□ -0.58
CACNA1C-210ENST00000399606 POMCP01189 267 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms