RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 ACAT1P24752 427 aaKnown RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 TFF2Q03403 129 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 SMAD4Q13485 552 aaKnown RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 CUL2Q13617 745 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 MAPRE1Q15691 268 aaKnown RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 NFE2Q16621 373 aaPredicted RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 CFAP221Q4G0U5 840 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 TRIM65Q6PJ69 517 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 LRSAM1Q6UWE0 723 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 GBP6Q6ZN66 633 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 APTXQ7Z2E3 356 aaKnown RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 GPR149Q86SP6 731 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 CRYBG2Q8N1P7 616 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 UBR7Q8N806 425 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 SLC7A14Q8TBB6 771 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 MYCBPAPQ8TBZ2 947 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 SUSD6Q92537 303 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 ZNF707Q96C28 371 aaPredicted RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 FUBP3Q96I24 572 aaKnown RBP eCLIP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 NT5C1BQ96P26 610 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 PGLYRP2Q96PD5 576 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 ARID3AQ99856 593 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 PRKD2Q9BZL6 878 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 INTS2Q9H0H0 1204 aaKnown RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 CRISPLD1Q9H336 500 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 DPEP3Q9H4B8 488 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 CYP4F11Q9HBI6 524 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 ABCB6Q9NP58 842 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 GCNT4Q9P109 453 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 GTF3C4Q9UKN8 822 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 INSL5Q9Y5Q6 135 aa11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 TCF20Q9UGU0 1960 aaKnown RBP11.15□□□□□ -0.62
CYCSP55-201ENST00000399027 MYO16Q9Y6X6 1858 aa11.15□□□□□ -0.63
CYCSP55-201ENST00000399027 SPTBN5Q9NRC6 3674 aaKnown RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 ANAPC1Q9H1A4 1944 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 GRXCR2A6NFK2 248 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PRRG1O14668 218 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PDGFRBP09619 1106 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PON1P27169 355 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 ELF1P32519 619 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 NDST1P52848 882 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 ZNF445P59923 1031 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PSMC1P62191 440 aaKnown RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 MRPS5P82675 430 aaKnown RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 GCNT1Q02742 428 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 DUSP4Q13115 394 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 SMAD2Q15796 467 aaKnown RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 EXOC3L4Q17RC7 722 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PPM1LQ5SGD2 360 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 RARS2Q5T160 578 aaKnown RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PHLDB3Q6NSJ2 640 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 CES5AQ6NT32 575 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 C4orf50Q6ZRC1 276 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 C12orf76Q8N812 135 aaPredicted RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 ATAD1Q8NBU5 361 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 B3GALNT2Q8NCR0 500 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 ANKRD20A12PQ8NF67 263 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 FEZF2Q8TBJ5 459 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 WHAMMQ8TF30 809 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PCED1BQ96HM7 432 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 TNIP3Q96KP6 325 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 ASB2Q96Q27 587 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 CBX8Q9HC52 389 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 CISHQ9NSE2 258 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 TAB2Q9NYJ8 693 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 HMGXB4Q9UGU5 601 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 USP15Q9Y4E8 981 aaPredicted RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 YIPF1Q9Y548 306 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 PCDHB5Q9Y5E4 795 aa11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 NUP210Q8TEM1 1887 aaPredicted RBP11.14□□□□□ -0.63
CYCSP55-201ENST00000399027 BECN2A8MW95 431 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 LRG1P02750 347 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 HAPLN1P10915 354 aaPredicted RBP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 ATP1A3P13637 1013 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 PTPN1P18031 435 aaKnown RBP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 SLC9A1P19634 815 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 MTHFRP42898 656 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 MAGEA11P43364 429 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 TUFMP49411 452 aaKnown RBP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 COPB1P53618 953 aaKnown RBP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 KCNMA1Q12791 1236 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 LRMPQ12912 555 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 PLD1Q13393 1074 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 CLUL1Q15846 466 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 CCDC142Q17RM4 750 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 DPY19L2P1Q6NXN4 242 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 TMC5Q6UXY8 1006 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 ARHGEF19Q8IW93 802 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 PPM1KQ8N3J5 372 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 TTC9BQ8N6N2 239 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 MYLPFQ96A32 169 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 FAM81BQ96LP2 452 aa11.13□□□□□ -0.63
CYCSP55-201ENST00000399027 RIPOR3Q96MK2 946 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms