RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ANHXE9PGG2 379 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 ABLIM3O94929 683 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 STAU1O95793 577 aaKnown RBP27.22■■□□□ 1.95
U2AF1-203ENST00000398137 CAVIN2O95810 425 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 POU2F2P09086 479 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 ZNF18P17022 549 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 ZNF445P59923 1031 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 WDR72Q3MJ13 1102 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 SPOPLQ6IQ16 392 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 LUZP1Q86V48 1076 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 PHOX2BQ99453 314 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 IMPG2Q9BZV3 1241 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.22■■□□□ 1.95
U2AF1-203ENST00000398137 NXF1Q9UBU9 619 aaKnown RBP27.22■■□□□ 1.95
U2AF1-203ENST00000398137 L1RE1Q9UN81 338 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 POLIQ9UNA4 740 aa27.22■■□□□ 1.95
U2AF1-203ENST00000398137 ARHGEF37A1IGU5 675 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 HUS1O60921 280 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 ASS1P00966 412 aaKnown RBP27.21■■□□□ 1.95
U2AF1-203ENST00000398137 NPR3P17342 541 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 TYMPP19971 482 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 FSHRP23945 695 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 TNNC1P63316 161 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 KRT31Q15323 416 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 SGSM1Q2NKQ1 1148 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 UVSSAQ2YD98 709 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 ZNF667Q5HYK9 610 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 WSCD1Q658N2 575 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 CWF19L1Q69YN2 538 aaKnown RBP27.21■■□□□ 1.95
U2AF1-203ENST00000398137 SCARA5Q6ZMJ2 495 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 PDCL2Q8N4E4 241 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 SLC44A3Q8N4M1 653 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 FAM200AQ8TCP9 573 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 MMS19Q96T76 1030 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 VRTNQ9H8Y1 702 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 RAB20Q9NX57 234 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 DNMT3BQ9UBC3 853 aaKnown RBP27.21■■□□□ 1.95
U2AF1-203ENST00000398137 COQ4Q9Y3A0 265 aa27.21■■□□□ 1.95
U2AF1-203ENST00000398137 CYP11A1P05108 521 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 NOP14P78316 857 aaKnown RBP27.2■■□□□ 1.94
U2AF1-203ENST00000398137 YWHAHQ04917 246 aaPredicted RBP27.2■■□□□ 1.94
U2AF1-203ENST00000398137 HTR4Q13639 388 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 MIIPQ5JXC2 388 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 POTEHQ6S545 545 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 ZNF461Q8TAF7 563 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 ITFG1Q8TB96 612 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 TAF4BQ92750 862 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 RPP25Q9BUL9 199 aaKnown RBP27.2■■□□□ 1.94
U2AF1-203ENST00000398137 FBXL5Q9UKA1 691 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 DSEQ9UL01 958 aa27.2■■□□□ 1.94
U2AF1-203ENST00000398137 PES1O00541 588 aaKnown RBP27.19■■□□□ 1.94
U2AF1-203ENST00000398137 ATP1A3P13637 1013 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 CTXN3Q4LDR2 81 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 VWA3BQ502W6 1294 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 OVOS1Q6IE37 1185 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 ALYREFQ86V81 257 aaKnown RBP27.19■■□□□ 1.94
U2AF1-203ENST00000398137 METTL23Q86XA0 190 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 ADGRF2Q8IZF7 708 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 TOP6BLQ8N6T0 577 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 CCDC150Q8NCX0 1101 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 SMYD3Q9H7B4 428 aa27.19■■□□□ 1.94
U2AF1-203ENST00000398137 APOBEC3GQ9HC16 384 aaKnown RBP27.19■■□□□ 1.94
U2AF1-203ENST00000398137 PMM2O15305 246 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 P4HA2O15460 535 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 SEC24AO95486 1093 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 CDK11BP21127 795 aaKnown RBP27.18■■□□□ 1.94
U2AF1-203ENST00000398137 CETN1Q12798 172 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 SOWAHAQ2M3V2 549 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 ZNF280DQ6N043 979 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 ANKRD20A12PQ8NF67 263 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 FGF13Q92913 245 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 NDST4Q9H3R1 872 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 NUMBLQ9Y6R0 609 aa27.18■■□□□ 1.94
U2AF1-203ENST00000398137 H7C4K7 107 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 RAP1GAPP47736 663 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 WDR44Q5JSH3 913 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 RTL10Q7L3V2 364 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 FGF14Q92915 247 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 NXPE3Q969Y0 559 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 CRACR2AQ9BSW2 395 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 NIF3L1Q9GZT8 377 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 VPS16Q9H269 839 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 GCNT4Q9P109 453 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 LIMA1Q9UHB6 759 aaKnown RBP27.17■■□□□ 1.94
U2AF1-203ENST00000398137 CDH7Q9ULB5 785 aa27.17■■□□□ 1.94
U2AF1-203ENST00000398137 KRBA1A5PL33 1030 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 PI15O43692 258 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 XYLBO75191 536 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 OAZ2O95190 189 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 TPM2P07951 284 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 CFHP08603 1231 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 P4HA1P13674 534 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 ATF2P15336 505 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 ASPAP45381 313 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 PTPN5P54829 565 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 ARPP19P56211 112 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 LRMPQ12912 555 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 SLC5A9Q2M3M2 681 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 ASTLQ6HA08 431 aaPredicted RBP27.16■■□□□ 1.94
U2AF1-203ENST00000398137 PARM1Q6UWI2 310 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms