RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CYTH4Q9UIA0 394 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 A0A0G2JLL6 359 aaPredicted RBP19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 LGR5O75473 907 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PROZP22891 400 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 RFC1P35251 1148 aaPredicted RBP19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ARSEP51690 589 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 IGBP1P78318 339 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PTPN20Q4JDL3 420 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ANKRD20A8PQ5CZ79 823 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 EFCAB12Q6NXP0 572 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TSHZ1Q6ZSZ6 1077 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PRRT2Q7Z6L0 340 aaPredicted RBP19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SULF1Q8IWU6 871 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PAPPA2Q9BXP8 1791 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ACKR2O00590 384 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TNNC2P02585 160 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 EIF4BP23588 611 aaKnown RBP19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MPP2Q14168 576 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 WDR72Q3MJ13 1102 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 KCNT1Q5JUK3 1230 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 BBOF1Q8ND07 529 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ANKRD36BP1Q96IX9 119 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 RBPJLQ9UBG7 517 aa19.34■□□□□ 0.69
CHRFAM7A-202ENST00000397827 RASSF9O75901 435 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 GH1P01241 217 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 DYNLT1P63172 113 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PLCB3Q01970 1234 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 E2F5Q15329 346 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PLPPR4Q7Z2D5 763 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PIGWQ7Z7B1 504 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 JOSD2Q8TAC2 188 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CCT6BQ92526 530 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 DCPSQ96C86 337 aaKnown RBP19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TMEM121Q9BTD3 319 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 C2orf40Q9H1Z8 148 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 FZD8Q9H461 694 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CCDC134Q9H6E4 229 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ZWILCHQ9H900 591 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 NAALADL1Q9UQQ1 740 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 OTOFQ9HC10 1997 aa19.33■□□□□ 0.69
CHRFAM7A-202ENST00000397827 LRRC37A2A6NM11 1700 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 hCG_1818297A0A087WSY0 165 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 MAGEA4P43358 317 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GPS1Q13098 491 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PIGHQ14442 188 aaPredicted RBP19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SURF1Q15526 300 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TFDP3Q5H9I0 405 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ZNF518BQ9C0D4 1074 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CDT1Q9H211 546 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 C10orf88Q9H8K7 445 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SLC40A1Q9NP59 571 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SAYSD1Q9NPB0 183 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PCDHGC3Q9UN70 934 aa19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.33■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ASAP2O43150 1006 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 IFNB1P01574 187 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RPSAP08865 295 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TXNP10599 105 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 BRAFP15056 766 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 EZRP15311 586 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CDKN2BP42772 138 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 FASTKD3Q14CZ7 662 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ZCCHC9Q8N567 271 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 EMC1Q8N766 993 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GDAP1Q8TB36 358 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 RNPEPQ9H4A4 650 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SPATS2LQ9NUQ6 558 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ANKRD33BA6NCL7 494 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GAS2O43903 313 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 B4GALT4O60513 344 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 NFICP08651 508 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PSMA2P25787 234 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CDH5P33151 784 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 KCTD2Q14681 263 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SNCBQ16143 134 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 EAPPQ56P03 285 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 LRRC38Q5VT99 294 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CAPN12Q6ZSI9 719 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SRRM1Q8IYB3 904 aaKnown RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ALLCQ8N6M5 410 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 KIF9Q9HAQ2 790 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SAMD15Q9P1V8 674 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 HMGXB4Q9UGU5 601 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SIX4Q9UIU6 781 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 GPR25O00155 361 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 DNALI1O14645 258 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 PECAM1P16284 738 aaPredicted RBP19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ATP5DP30049 168 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 LMNB2Q03252 620 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 MBTD1Q05BQ5 628 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 KIAA0319LQ8IZA0 1049 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ARFGAP1Q8N6T3 406 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 MMP19Q99542 508 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 SDCBP2Q9H190 292 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 ETAA1Q9NY74 926 aa19.32■□□□□ 0.68
CHRFAM7A-202ENST00000397827 TCP11X1B4DZS4 312 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 KRT3P12035 628 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 IL1R2P27930 398 aa19.31■□□□□ 0.68
CHRFAM7A-202ENST00000397827 CCDC62Q6P9F0 684 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms