RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MAP3K21Q5TCX8 1036 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PALB2Q86YC2 1186 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 FAM96AQ9H5X1 160 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 DDX3YO15523 660 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 ACTN1P12814 892 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TTLL12Q14166 644 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SLC14A2Q15849 920 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 EFCAB12Q6NXP0 572 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 PDIK1LQ8N165 341 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MTG1Q9BT17 334 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 THAP2Q9H0W7 228 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 GPRC5CQ9NQ84 441 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MKS1Q9NXB0 559 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MYO7AQ13402 2215 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TTC4O95801 387 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 KRT3P12035 628 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 KRT15P19012 456 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 HADHAP40939 763 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 GPD2P43304 727 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 FAM26DQ5JW98 314 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 FBXO47Q5MNV8 452 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TMEM270Q6UE05 265 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MRPL10Q7Z7H8 261 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 CHCHD4Q8N4Q1 142 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 C1orf127Q8N9H9 656 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 RAB3IL1Q8TBN0 382 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SEMA4DQ92854 862 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 ZDHHC18Q9NUE0 388 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 ANKRD63C9JTQ0 380 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TRAPPC3O43617 180 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 BUB1O43683 1085 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 DLATP10515 647 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TAF6P49848 677 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 NFX1Q12986 1120 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 GRIK4Q16099 956 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 ODF2Q5BJF6 829 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 RTL10Q7L3V2 364 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 KLHDC8BQ8IXV7 354 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 CFAP57Q96MR6 1250 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 ELAC1Q9H777 363 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SNAI1O95863 264 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TGM2P21980 687 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SERPINB6P35237 376 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 GUCY2DQ02846 1103 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MKRN4PQ13434 485 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TAF1CQ15572 869 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 P3H1Q32P28 736 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SLC10A6Q3KNW5 377 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 LGSNQ5TDP6 509 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 ART4Q93070 314 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TLCD1Q96CP7 247 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TMEM176AQ96HP8 235 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 HPDLQ96IR7 371 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 HNRNPABQ99729 332 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SIKE1Q9BRV8 207 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 NPHP3-ACAD11A0A0J9YXS1 232 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MOCS3O95396 460 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 CNTFP26441 200 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 OASLQ15646 514 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 WDR72Q3MJ13 1102 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 DNAJC21Q5F1R6 531 aaKnown RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MTHFD1LQ6UB35 978 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SND1Q7KZF4 910 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 DUSP10Q9Y6W6 482 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MYO10Q9HD67 2058 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SLC2A3P11169 496 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 MYL4P12829 197 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 CACNB1Q02641 598 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-206ENST00000397617 SLC20A2Q08357 652 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 EEF2KMTQ96G04 330 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 TRPV6Q9H1D0 765 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 PDZD7Q9H5P4 517 aa6.18□□□□□ -1.42
PTPRD-206ENST00000397617 PIRO00625 290 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 EOMESO95936 686 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 NAA20P61599 178 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 RNASELQ05823 741 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 LAMB3Q13751 1172 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 VSTM1Q6UX27 236 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 CATSPER4Q7RTX7 472 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 ZCCHC9Q8N567 271 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 ANKS4BQ8N8V4 417 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 ACMSDQ8TDX5 336 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 C2orf15Q8WU43 125 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SNF8Q96H20 258 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SNX27Q96L92 541 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 CYP26A1O43174 497 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 FAM107AO95990 144 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 MMP13P45452 471 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SARNPP82979 210 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 CCDC137Q6PK04 289 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SEPT14Q6ZU15 432 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 LMNTD2Q8IXW0 634 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 LRRC1Q9BTT6 524 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 GPR182O15218 404 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 CYP11A1P05108 521 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SDC4P31431 198 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 PHBP35232 272 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 COILP38432 576 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 TRIM42Q8IWZ5 723 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 PAK5Q9P286 719 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms