RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SYCP2LQ5T4T6 812 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 CC2D2BQ6DHV5 1058 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 TMEM270Q6UE05 265 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 NDNQ99608 321 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 AGO4Q9HCK5 861 aaKnown RBP25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 PLSCR1O15162 318 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 CYP1A1P04798 512 aaPredicted RBP25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 ACOT2P49753 483 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 DYNLT1P63172 113 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 CYP24A1Q07973 514 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 C12orf56Q8IXR9 622 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 CHURC1Q8WUH1 139 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 DTNBP1Q96EV8 351 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 TRIM55Q9BYV6 548 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 ESRRAP11474 423 aaPredicted RBP25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 ARFIP2P53365 341 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 ZNF516Q92618 1163 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 TLR3O15455 904 aaKnown RBP25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 PROSCO94903 275 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 AMPD1P23109 780 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 SEZ6Q53EL9 994 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 TXNRD3NBQ6F5E7 133 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 KRT27Q7Z3Y8 459 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 ARHGAP18Q8N392 663 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 TMEM121Q9BTD3 319 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 DDX43Q9NXZ2 648 aaKnown RBP25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 CCNE2O96020 404 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 NCKAP1LP55160 1127 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 LARGE2Q8N3Y3 721 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 ZNF276Q8N554 614 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 SPATA16Q9BXB7 569 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 ASCC2Q9H1I8 757 aaPredicted RBP25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 MMADHCQ9H3L0 296 aaPredicted RBP25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 OCEL1Q9H607 264 aa25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 RAVER2Q9HCJ3 691 aaKnown RBP25.21■■□□□ 1.63
CSNK1E-203ENST00000396832 TUBGCP5Q96RT8 1024 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 MANSC1Q9H8J5 431 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 LMCD1Q9NZU5 365 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 PSMC3IPQ9P2W1 217 aaPredicted RBP25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 HARSP12081 509 aaKnown RBP25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 PGM1P36871 562 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 ALCAMQ13740 583 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 LRRC6Q86X45 466 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 RHOT1Q8IXI2 618 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 TAAR1Q96RJ0 339 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 TMEM39BQ9GZU3 492 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 VCX3BQ9H321 246 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 VCX3AQ9NNX9 186 aa25.2■■□□□ 1.62
CSNK1E-203ENST00000396832 ZBED4O75132 1171 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 SLC1A1P43005 524 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 CCDC62Q6P9F0 684 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 MFSD7Q6UXD7 560 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 ANO5Q75V66 913 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 PTPRJQ12913 1337 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 DNALI1O14645 258 aaPredicted RBP25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 KRT1P04264 644 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 PDIA2Q13087 525 aaKnown RBP25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 MAMLD1Q13495 774 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 ZNF394Q53GI3 561 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 MON1BQ7L1V2 547 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 TCP10LQ8TDR4 215 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 SKA1Q96BD8 255 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 OPTNQ96CV9 577 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 SLC24A2Q9UI40 661 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 PCDHB4Q9Y5E5 795 aa25.19■■□□□ 1.62
CSNK1E-203ENST00000396832 C2orf71A6NGG8 1288 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 A8MXQ7 604 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 CREB3O43889 395 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 IZUMO2Q6UXV1 221 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 MAP4K3Q8IVH8 894 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 TMEM120AQ9BXJ8 343 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 KCNK13Q9HB14 408 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 SERPINA10Q9UK55 444 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 ANGPTL2Q9UKU9 493 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 COQ4Q9Y3A0 265 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 MMP10P09238 476 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 ALDH1B1P30837 517 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 SSTR1P30872 391 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 RTP1P59025 263 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 CEP170P1Q96L14 293 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 EXOC7Q9UPT5 735 aa25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 MYH9P35579 1960 aaKnown RBP25.18■■□□□ 1.62
CSNK1E-203ENST00000396832 SGK1O00141 431 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 DNAJC6O75061 913 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 RARBP10826 455 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 CDK16Q00536 496 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 NFX1Q12986 1120 aaKnown RBP25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 TTC7BQ86TV6 843 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 FAM161BQ96MY7 647 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 TSSK1BQ9BXA7 367 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 SLC17A7Q9P2U7 560 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 MTO1Q9Y2Z2 717 aaKnown RBP25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 GNA15P30679 374 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 NCSTNQ92542 709 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 IVNS1ABPQ9Y6Y0 642 aa25.17■■□□□ 1.62
CSNK1E-203ENST00000396832 HLA-DRAP01903 254 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 CPA2P48052 419 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms