RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 A0A1W2PQJ5 194 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 RBP5P82980 135 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 CHRNB3Q05901 458 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 CIAPIN1Q6FI81 312 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 TFB1MQ8WVM0 346 aaKnown RBP14.53□□□□□ -0.08
COL4A3-202ENST00000396578 EFCAB1Q9HAE3 211 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 TDP2O95551 362 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 MYCP01106 439 aaPredicted RBP14.53□□□□□ -0.08
COL4A3-202ENST00000396578 SARSP49591 514 aaKnown RBP14.53□□□□□ -0.08
COL4A3-202ENST00000396578 CCZ1BP86790 482 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 CCZ1P86791 482 aaPredicted RBP14.53□□□□□ -0.08
COL4A3-202ENST00000396578 CLEC16AQ2KHT3 1053 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 TRIM63Q969Q1 353 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 C7orf25Q9BPX7 421 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 SLC39A10Q9ULF5 831 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 THRAP10827 490 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 CNGA2Q16280 664 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 HIST2H2ACQ16777 129 aaPredicted RBP14.53□□□□□ -0.08
COL4A3-202ENST00000396578 HIST2H2AA3Q6FI13 130 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 USP38Q8NB14 1042 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 OLFM1Q99784 485 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 CPVLQ9H3G5 476 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 AGPAT5Q9NUQ2 364 aa14.53□□□□□ -0.08
COL4A3-202ENST00000396578 ZNF335Q9H4Z2 1342 aaPredicted RBP14.53□□□□□ -0.08
COL4A3-202ENST00000396578 ZCCHC18P0CG32 403 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 TAF2Q6P1X5 1199 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 IPMKQ8NFU5 416 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 CENPTQ96BT3 561 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 ALDH8A1Q9H2A2 487 aaPredicted RBP14.52□□□□□ -0.08
COL4A3-202ENST00000396578 NCAPD2Q15021 1401 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 CFAP99D6REC4 459 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 USP33Q8TEY7 942 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 DNAJC7Q99615 494 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 GPR63Q9BZJ6 419 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 PHTF1Q9UMS5 762 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 DYTNA2CJ06 578 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 HSD17B3P37058 310 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 ACADSBP45954 432 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 SCTRP47872 440 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 SNRNP35Q16560 246 aaKnown RBP14.52□□□□□ -0.08
COL4A3-202ENST00000396578 ARID3BQ8IVW6 561 aaPredicted RBP14.52□□□□□ -0.08
COL4A3-202ENST00000396578 ZNF333Q96JL9 665 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 TRIM9Q9C026 710 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 HDHD2Q9H0R4 259 aa14.52□□□□□ -0.08
COL4A3-202ENST00000396578 UTP6Q9NYH9 597 aaKnown RBP14.52□□□□□ -0.08
COL4A3-202ENST00000396578 RHOBTB1O94844 696 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 DALRD3Q5D0E6 543 aaKnown RBP14.52□□□□□ -0.09
COL4A3-202ENST00000396578 CELF4Q9BZC1 486 aaKnown RBP14.52□□□□□ -0.09
COL4A3-202ENST00000396578 CLEC4MQ9H2X3 399 aaPredicted RBP14.52□□□□□ -0.09
COL4A3-202ENST00000396578 RERGLQ9H628 205 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 KCND2Q9NZV8 630 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 VWA5AO00534 786 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 SEC24CP53992 1094 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 ZRANB3Q5FWF4 1079 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 KDM7AQ6ZMT4 941 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 C11orf96Q7Z7L8 435 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 MB21D2Q8IYB1 491 aaPredicted RBP14.52□□□□□ -0.09
COL4A3-202ENST00000396578 RNF149Q8NC42 400 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 VCPKMTQ9H867 229 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 RMND5AQ9H871 391 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 TMCC3Q9ULS5 477 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 IGSF1Q8N6C5 1336 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 ARHGEF40Q8TER5 1519 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 ASNA1O43681 348 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 AKR1B1P15121 316 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 CALB2P22676 271 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 RGS7P49802 495 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 UNC45BQ8IWX7 931 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 PRRG3Q9BZD7 231 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 UBAP1Q9NZ09 502 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 HEY2Q9UBP5 337 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 HAO1Q9UJM8 370 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 IQCA1LA6NCM1 817 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 CDC42EP1Q00587 391 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 SMTNL2Q2TAL5 461 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 ZNF668Q96K58 619 aaPredicted RBP14.52□□□□□ -0.09
COL4A3-202ENST00000396578 RNF112Q9ULX5 631 aa14.52□□□□□ -0.09
COL4A3-202ENST00000396578 CENPXA8MT69 81 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 CSE1LP55060 971 aaKnown RBP14.51□□□□□ -0.09
COL4A3-202ENST00000396578 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
COL4A3-202ENST00000396578 LMBRD2Q68DH5 695 aaPredicted RBP14.51□□□□□ -0.09
COL4A3-202ENST00000396578 CHSY1Q86X52 802 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 LRRC39Q96DD0 335 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 MKL2Q9ULH7 1088 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 PRKCBP05771 671 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 HSMCR30P0CW71 290 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 FCGR1AP12314 374 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 PDZK1Q5T2W1 519 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 ZNF677Q86XU0 584 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 SLC25A41Q8N5S1 370 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 STKLD1Q8NE28 680 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 FHDC1Q9C0D6 1143 aaPredicted RBP14.51□□□□□ -0.09
COL4A3-202ENST00000396578 PIPSLA2A3N6 862 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 FOXN1O15353 648 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 COMTP21964 271 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 DPYDQ12882 1025 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 SNX17Q15036 470 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 TRIQKQ629K1 86 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 CDH24Q86UP0 819 aa14.51□□□□□ -0.09
COL4A3-202ENST00000396578 C10orf53Q8N6V4 93 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms