RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 PDCL2Q8N4E4 241 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 TOP6BLQ8N6T0 577 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 MAB21L3Q8N8X9 362 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 LEO1Q8WVC0 666 aaPredicted RBP17.58■□□□□ 0.4
DDR1-229ENST00000396342 DNAJC19Q96DA6 116 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 RMDN1Q96DB5 314 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 TRPC7Q9HCX4 862 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 GKN1Q9NS71 199 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 GTSE1Q9NYZ3 720 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 SLC8A2Q9UPR5 921 aa17.58■□□□□ 0.4
DDR1-229ENST00000396342 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
DDR1-229ENST00000396342 PPP1R37O75864 691 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 USP17L7P0C7H9 530 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 ATF6P18850 670 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 SOX9P48436 509 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 NLRP12P59046 1061 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 FZD5Q13467 585 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 PON2Q15165 354 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 RSPO4Q2I0M5 234 aaPredicted RBP17.57■□□□□ 0.4
DDR1-229ENST00000396342 INTS6LQ5JSJ4 861 aaKnown RBP17.57■□□□□ 0.4
DDR1-229ENST00000396342 FAM173BQ6P4H8 233 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 MON1AQ86VX9 555 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 LONP2Q86WA8 852 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 CPA6Q8N4T0 437 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 NELL1Q92832 810 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 FUBP3Q96I24 572 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDR1-229ENST00000396342 HPDLQ96IR7 371 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 ZFYVE19Q96K21 471 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 MMS19Q96T76 1030 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 PDE11AQ9HCR9 933 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 GDAP2Q9NXN4 497 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 FAM13BQ9NYF5 915 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 MAGEC2Q9UBF1 373 aaPredicted RBP17.57■□□□□ 0.4
DDR1-229ENST00000396342 MYH15Q9Y2K3 1946 aa17.57■□□□□ 0.4
DDR1-229ENST00000396342 TRAV19A0A0A6YYK7 116 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 CKMP06732 381 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 RETP07949 1114 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 TRIM21P19474 475 aaKnown RBP17.56■□□□□ 0.4
DDR1-229ENST00000396342 CDR1P51861 262 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 KCNA1Q09470 495 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 KCNB1Q14721 858 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 HEATR6Q6AI08 1181 aaKnown RBP17.56■□□□□ 0.4
DDR1-229ENST00000396342 POTEHQ6S545 545 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 LRRTM3Q86VH5 581 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 C1orf127Q8N9H9 656 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 CBWD1Q9BRT8 395 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 STRA6Q9BX79 667 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 SLC46A2Q9BY10 475 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 MTMR12Q9C0I1 747 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 L1RE1Q9UN81 338 aa17.56■□□□□ 0.4
DDR1-229ENST00000396342 EP300Q09472 2414 aaPredicted RBP17.55■□□□□ 0.4
DDR1-229ENST00000396342 GVINP1Q7Z2Y8 2422 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 ARNTLO00327 626 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 EIF3DO15371 548 aaKnown RBP eCLIP17.55■□□□□ 0.4
DDR1-229ENST00000396342 LRP3O75074 770 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 PPP6R2O75170 966 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 PRAMEF12O95522 483 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 TNNI1P19237 187 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 IFNAR2P48551 515 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 NASPP49321 788 aaPredicted RBP17.55■□□□□ 0.4
DDR1-229ENST00000396342 SNRPFP62306 86 aaKnown RBP17.55■□□□□ 0.4
DDR1-229ENST00000396342 TNNC1P63316 161 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 SATB1Q01826 763 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 TRPC3Q13507 836 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 RUNX3Q13761 415 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 LPAL2Q16609 132 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 DDR2Q16832 855 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 DHX58Q96C10 678 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 RSPRY1Q96DX4 576 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 SMG9Q9H0W8 520 aaKnown RBP17.55■□□□□ 0.4
DDR1-229ENST00000396342 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
DDR1-229ENST00000396342 GTF3C4Q9UKN8 822 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 CDH9Q9ULB4 789 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 MTMR6Q9Y217 621 aa17.55■□□□□ 0.4
DDR1-229ENST00000396342 FRMD3A2A2Y4 597 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 CHURC1-FNTBB4DL54 471 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 CUTAO60888 179 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 PHACTR2O75167 634 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 PAPSS2O95340 614 aaPredicted RBP17.54■□□□□ 0.4
DDR1-229ENST00000396342 ACAT1P24752 427 aaKnown RBP17.54■□□□□ 0.4
DDR1-229ENST00000396342 CYP2F1P24903 491 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 GRIK1P39086 918 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 FNTBP49356 437 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 TNK2Q07912 1038 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 ZNF268Q14587 947 aaPredicted RBP17.54■□□□□ 0.4
DDR1-229ENST00000396342 CFAP221Q4G0U5 840 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 FBXO43Q4G163 708 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 TXNDC8Q6A555 127 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 VSTM1Q6UX27 236 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 WDR49Q8IV35 697 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 HSCBQ8IWL3 235 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 ATP2A3Q93084 1043 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 TRMT2BQ96GJ1 504 aaKnown RBP17.54■□□□□ 0.4
DDR1-229ENST00000396342 CEP295NLQ96MC4 621 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 INTS13Q9NVM9 706 aa17.54■□□□□ 0.4
DDR1-229ENST00000396342 HSPBP1Q9NZL4 362 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms