RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 GRAMD1AQ96CP6 724 aa16.85■□□□□ 0.29
CCHCR1-202ENST00000396263 CISHQ9NSE2 258 aa16.85■□□□□ 0.29
CCHCR1-202ENST00000396263 PCDHGC3Q9UN70 934 aa16.85■□□□□ 0.29
CCHCR1-202ENST00000396263 EXOC1LA0A1B0GW35 172 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 ITGAVP06756 1048 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 ZSCAN5DPP0CG00 497 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 EIF4BP23588 611 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 SLC18A1P54219 525 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 MYL6P60660 151 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 NCALDP61601 193 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 SARNPP82979 210 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 CNTN2Q02246 1040 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 BNIP1Q12981 228 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 GPS1Q13098 491 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 RIPK1Q13546 671 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 TMED2Q15363 201 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 MTFR1Q15390 333 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 TFDP3Q5H9I0 405 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 TRABD2AQ86V40 505 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 MRPL4Q9BYD3 311 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 MTMR12Q9C0I1 747 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 ATP6V1G2O95670 118 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 PECAM1P16284 738 aaPredicted RBP16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 TAC1P20366 129 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 CALRP27797 417 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 GCKP35557 465 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 CDKN2BP42772 138 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 ALDH5A1P51649 535 aaPredicted RBP16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 SGSM1Q2NKQ1 1148 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 CGB2Q6NT52 195 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 GPAT2Q6NUI2 795 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 WDTC1Q8N5D0 677 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 ZC3H15Q8WU90 426 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 STAMBPL1Q96FJ0 436 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 RXFP1Q9HBX9 757 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 SHOC2Q9UQ13 582 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 PPME1Q9Y570 386 aa16.84■□□□□ 0.29
CCHCR1-202ENST00000396263 PRPF4O43172 522 aaKnown RBP eCLIP16.83■□□□□ 0.281e-8■■□□□ 11.6
CCHCR1-202ENST00000396263 STAT5BP51692 787 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 IL9RQ01113 521 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 SURF1Q15526 300 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 ZKSCAN8Q15776 578 aaPredicted RBP16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 DUOXA2Q1HG44 320 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 WDR72Q3MJ13 1102 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 RNASEH2BQ5TBB1 312 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 FAM160B1Q5W0V3 765 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 RNF43Q68DV7 783 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 CDCA2Q69YH5 1023 aaPredicted RBP16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 TXNRD3NBQ6F5E7 133 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 POLNQ7Z5Q5 900 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 MAB21L3Q8N8X9 362 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 PRPF31Q8WWY3 499 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 NOD2Q9HC29 1040 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 PCDH9Q9HC56 1237 aa16.83■□□□□ 0.28
CCHCR1-202ENST00000396263 OGTO15294 1046 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ALOX15BO15296 676 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ASMTLO95671 621 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ETS1P14921 441 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 SLC8A3P57103 927 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ACVR2BQ13705 512 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 RASA2Q15283 850 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ACO2Q99798 780 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ECT2Q9H8V3 914 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 PPCSQ9HAB8 311 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 KIF9Q9HAQ2 790 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 SENP1Q9P0U3 644 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 MAGEB2O15479 319 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 EDNRBP24530 442 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 WDR4P57081 412 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ZNF268Q14587 947 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 TBC1D1Q86TI0 1168 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ERICH1Q86X53 443 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 NSMCE1Q8WV22 266 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 THOC1Q96FV9 657 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 BAIAP2L1Q9UHR4 511 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 GGT7Q9UJ14 662 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 CPSF3Q9UKF6 684 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 EFR3BQ9Y2G0 817 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 CSADQ9Y600 493 aa16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-202ENST00000396263 ABLIM1O14639 778 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 NQO1P15559 274 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 FOXN2P32314 431 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 MYO1EQ12965 1108 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 FASTKD3Q14CZ7 662 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 SH3D19Q5HYK7 790 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 IER5Q5VY09 327 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 ZBTB33Q86T24 672 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 FITM2Q8N6M3 262 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 SLC35B2Q8TB61 432 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 DENND1AQ8TEH3 1009 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 SPDL1Q96EA4 605 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 ELP3Q9H9T3 547 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 KLHL14Q9P2G3 628 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 STRIP2Q9ULQ0 834 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 LRRD1A4D1F6 860 aa16.81■□□□□ 0.28
CCHCR1-202ENST00000396263 C3orf70A6NLC5 250 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms