RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CPXM1Q96SM3 734 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 CHST7Q9NS84 486 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 PSD3Q9NYI0 1048 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
ITGB1-202ENST00000396033 PPEF2O14830 753 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 KRT14P02533 472 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 KRT1P04264 644 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 GNAT1P11488 350 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 AKAP5P24588 427 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
ITGB1-202ENST00000396033 DHX9Q08211 1270 aaKnown RBP12.83□□□□□ -0.36
ITGB1-202ENST00000396033 MTMR3Q13615 1198 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 PIGHQ14442 188 aaPredicted RBP12.83□□□□□ -0.36
ITGB1-202ENST00000396033 C18orf25Q96B23 403 aaPredicted RBP12.83□□□□□ -0.36
ITGB1-202ENST00000396033 OSBPL8Q9BZF1 889 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 KRT3P12035 628 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ACTN2P35609 894 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 CETN2P41208 172 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 DRG2P55039 364 aaKnown RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 UAP1Q16222 522 aaPredicted RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 RNF25Q96BH1 459 aaPredicted RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 NT5C1AQ9BXI3 368 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 TSPYL1Q9H0U9 437 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ZDHHC18Q9NUE0 388 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 RNF19AQ9NV58 838 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ABT1Q9ULW3 272 aaKnown RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 SNX9Q9Y5X1 595 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 TRIP12Q14669 1992 aaPredicted RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 TRIP11Q15643 1979 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 MYADML2A6NDP7 307 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 IGHA2P01877 340 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 HMGCRP04035 888 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ERBB2P04626 1255 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 PSMA2P25787 234 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 GBP1P32455 592 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 CNGA2Q16280 664 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ODF2Q5BJF6 829 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ICE2Q659A1 982 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 LRRC31Q6UY01 552 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 FAM76AQ8TAV0 307 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ARL8AQ96BM9 186 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 RBM41Q96IZ5 413 aaKnown RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 DCLK3Q9C098 648 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 FAM124BQ9H5Z6 455 aaPredicted RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 YY1AP1Q9H869 796 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 GRHL1Q9NZI5 618 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 CNTN3Q9P232 1028 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 PI4K2BG5E9Z4 385 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 KRT17Q04695 432 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 PDCLQ13371 301 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 ATP13A4Q4VNC1 1196 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 TTMPQ5BVD1 217 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 XYLT1Q86Y38 959 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 TRPV1Q8NER1 839 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 UBA3Q8TBC4 463 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 GEMIN8Q9NWZ8 242 aaKnown RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 WDR35Q9P2L0 1181 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
ITGB1-202ENST00000396033 R3HDM2Q9Y2K5 976 aaKnown RBP12.82□□□□□ -0.36
ITGB1-202ENST00000396033 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 RFC1P35251 1148 aaPredicted RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 CRYBB1P53674 252 aaPredicted RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 NFX1Q12986 1120 aaKnown RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 KLF1Q13351 362 aaPredicted RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 ZDHHC24Q6UX98 284 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 JOSD2Q8TAC2 188 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 FBXO25Q8TCJ0 367 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 KLK14Q9P0G3 267 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 DUSP11O75319 330 aaKnown RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 ZBTB6Q15916 424 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 LRRC38Q5VT99 294 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 GRK7Q8WTQ7 553 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 MRPL45Q9BRJ2 306 aaKnown RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 TSPAN16Q9UKR8 245 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 UBQLN1Q9UMX0 589 aaKnown RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 ATP8A1Q9Y2Q0 1164 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 ATF7P17544 494 aaPredicted RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 GPD2P43304 727 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 CEP85LQ5SZL2 805 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 KAZNQ674X7 775 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 LRIG3Q6UXM1 1119 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 ALKAL1Q6UXT8 129 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 ANKS1BQ7Z6G8 1248 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 RCOR2Q8IZ40 523 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 LRRC52Q8N7C0 313 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 SLCO2A1Q92959 643 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 SLITRK1Q96PX8 696 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
ITGB1-202ENST00000396033 MTRF1LQ9UGC7 380 aaKnown RBP12.81□□□□□ -0.36
ITGB1-202ENST00000396033 SCN1AP35498 2009 aa12.8□□□□□ -0.36
ITGB1-202ENST00000396033 FCGRTP55899 365 aa12.8□□□□□ -0.36
ITGB1-202ENST00000396033 GSCP56915 257 aaPredicted RBP12.8□□□□□ -0.36
ITGB1-202ENST00000396033 ZNF268Q14587 947 aaPredicted RBP12.8□□□□□ -0.36
ITGB1-202ENST00000396033 GNASQ5JWF2 1037 aa12.8□□□□□ -0.36
ITGB1-202ENST00000396033 C9orf57Q5W0N0 161 aa12.8□□□□□ -0.36
ITGB1-202ENST00000396033 NME8Q8N427 588 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms