RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 BRD3Q15059 726 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 LIN9Q5TKA1 542 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 NAA35Q5VZE5 725 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 CCDC70Q6NSX1 233 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 ZNF564Q8TBZ8 553 aaPredicted RBP20.47■□□□□ 0.87
LMNB1-202ENST00000395354 ACTRT1Q8TDG2 376 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 CYFIP2Q96F07 1278 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 HPDLQ96IR7 371 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 YME1L1Q96TA2 773 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 NUP85Q9BW27 656 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 SLC38A7Q9NVC3 462 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 TBC1D13Q9NVG8 400 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 NXF1Q9UBU9 619 aaKnown RBP20.47■□□□□ 0.87
LMNB1-202ENST00000395354 CNOT8Q9UFF9 292 aaKnown RBP20.47■□□□□ 0.87
LMNB1-202ENST00000395354 PCDHGC3Q9UN70 934 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 AGAP1Q9UPQ3 857 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 PTPRSQ13332 1948 aa20.47■□□□□ 0.87
LMNB1-202ENST00000395354 CALCAP01258 141 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 WEE2P0C1S8 567 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 CD58P19256 250 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 MCM3P25205 808 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 POLR2BP30876 1174 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 RNASELQ05823 741 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 C1QBPQ07021 282 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 GRIK3Q13003 919 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 PAN2Q504Q3 1202 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 MON1BQ7L1V2 547 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 BEST2Q8NFU1 509 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 RUBCNQ92622 972 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 C18orf25Q96B23 403 aaPredicted RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 GOLPH3Q9H4A6 298 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 UBQLN1Q9UMX0 589 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 POLIQ9UNA4 740 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 ALG6Q9Y672 507 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 MED7O43513 233 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 XPOTO43592 962 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 CDH5P33151 784 aaPredicted RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 HTRA4P83105 476 aaPredicted RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 MYO1EQ12965 1108 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 CLUL1Q15846 466 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 ZNF280BQ86YH2 543 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 RASGEF1CQ8N431 466 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 CPA5Q8WXQ8 436 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 RAD9AQ99638 391 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 MRPL9Q9BYD2 267 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 RC3H2Q9HBD1 1191 aaKnown RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 TTC7AQ9ULT0 858 aaPredicted RBP20.46■□□□□ 0.87
LMNB1-202ENST00000395354 INSL6Q9Y581 213 aa20.46■□□□□ 0.87
LMNB1-202ENST00000395354 FNDC1Q4ZHG4 1894 aaPredicted RBP20.45■□□□□ 0.86
LMNB1-202ENST00000395354 CCDC151A5D8V7 595 aa20.45■□□□□ 0.86
LMNB1-202ENST00000395354 DDX3YO15523 660 aaKnown RBP20.45■□□□□ 0.86
LMNB1-202ENST00000395354 CYP3A5P20815 502 aa20.45■□□□□ 0.86
LMNB1-202ENST00000395354 BTG3Q14201 252 aaPredicted RBP20.45■□□□□ 0.86
LMNB1-202ENST00000395354 WDR93Q6P2C0 686 aa20.45■□□□□ 0.86
LMNB1-202ENST00000395354 SCARA5Q6ZMJ2 495 aa20.45■□□□□ 0.86
LMNB1-202ENST00000395354 LRRC52Q8N7C0 313 aa20.45■□□□□ 0.86
LMNB1-202ENST00000395354 TMEM35BQ8NCS4 154 aa20.45■□□□□ 0.86
LMNB1-202ENST00000395354 FAM193BQ96PV7 902 aaPredicted RBP20.45■□□□□ 0.86
LMNB1-202ENST00000395354 EPC1Q9H2F5 836 aa20.45■□□□□ 0.86
LMNB1-202ENST00000395354 TDRD15B5MCY1 1934 aaKnown RBP20.44■□□□□ 0.86
LMNB1-202ENST00000395354 GRXCR1A8MXD5 290 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 TLL1O43897 1013 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 DDHD2O94830 711 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 RHOXF2BP0C7M4 288 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 CLCN6P51797 869 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 GUCY2FP51841 1108 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 SOX4Q06945 474 aaPredicted RBP20.44■□□□□ 0.86
LMNB1-202ENST00000395354 C2orf54Q08AI8 447 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 GLE1Q53GS7 698 aaKnown RBP20.44■□□□□ 0.86
LMNB1-202ENST00000395354 CHRDL2Q6WN34 429 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 CMTR2Q8IYT2 770 aaKnown RBP20.44■□□□□ 0.86
LMNB1-202ENST00000395354 LRRC43Q8N309 656 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 MS4A14Q96JA4 679 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 RHOXF2Q9BQY4 288 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 CARD9Q9H257 536 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 LHX5Q9H2C1 402 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 MRPL47Q9HD33 250 aaKnown RBP20.44■□□□□ 0.86
LMNB1-202ENST00000395354 ADAM22Q9P0K1 906 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 TUBGCP4Q9UGJ1 667 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 CEP83Q9Y592 693 aa20.44■□□□□ 0.86
LMNB1-202ENST00000395354 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.44■□□□□ 0.86
LMNB1-202ENST00000395354 PDCD11Q14690 1871 aaKnown RBP20.44■□□□□ 0.86
LMNB1-202ENST00000395354 CILPO75339 1184 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 DNA2P51530 1060 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 TNNC1P63316 161 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 INCA1Q0VD86 236 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 TUSC3Q13454 348 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 FAM109BQ6ICB4 259 aaPredicted RBP20.43■□□□□ 0.86
LMNB1-202ENST00000395354 TDHQ8IZJ6 230 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 TMEM130Q8N3G9 435 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 UBL4BQ8N7F7 174 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 HNRNPLLQ8WVV9 542 aaKnown RBP20.43■□□□□ 0.86
LMNB1-202ENST00000395354 SDCBP2Q9H190 292 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 GOLGA2P5Q9HBQ8 144 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 LCMT1Q9UIC8 334 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 SCINQ9Y6U3 715 aa20.43■□□□□ 0.86
LMNB1-202ENST00000395354 PGRMC1O00264 195 aaKnown RBP20.42■□□□□ 0.86
LMNB1-202ENST00000395354 ATMINO43313 823 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-202ENST00000395354 CEP104O60308 925 aa20.42■□□□□ 0.86
LMNB1-202ENST00000395354 CALB1P05937 261 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms