RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 EMC1Q8N766 993 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 JOSD2Q8TAC2 188 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 PRPF31Q8WWY3 499 aaKnown RBP14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 RAB6CQ9H0N0 254 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 NOD2Q9HC29 1040 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 IGF2BP3O00425 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 TGFB3P10600 412 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 OSBPP22059 807 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 IL1R2P27930 398 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 PLCB3Q01970 1234 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 MSS51Q4VC12 460 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 DENND1BQ6P3S1 775 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 KIRREL3Q8IZU9 778 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 CCDC89Q8N998 374 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 GPR20Q99678 358 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 KIAA1586Q9HCI6 787 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 CISHQ9NSE2 258 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 PARVAQ9NVD7 372 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 EXOC1LA0A1B0GW35 172 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 TCRBV5S1A1TA0A578 114 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 B4GALT5O43286 388 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 FAM189A1O60320 539 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 KRT16P08779 473 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 ZNF132P52740 706 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 CDH8P55286 799 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 GJC2Q5T442 439 aaPredicted RBP14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 ECHDC2Q86YB7 292 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 ZBED8Q8IZ13 594 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 ZCCHC9Q8N567 271 aaKnown RBP14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 FAM81BQ96LP2 452 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 SPATA33Q96N06 139 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 PPP1R16BQ96T49 567 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 VPS37BQ9H9H4 285 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 STK38LQ9Y2H1 464 aa14.22□□□□□ -0.13
GTF2F1-201ENST00000394456 TCRBV7S3A2A0A539 114 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 PIK3R2O00459 728 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 RFC5P40937 340 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 TFAMQ00059 246 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 DNAJC24Q6P3W2 148 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 DCUN1D2Q6PH85 259 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 SYDE1Q6ZW31 735 aaPredicted RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 FASTKD5Q7L8L6 764 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 THNSL1Q8IYQ7 743 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 UBR7Q8N806 425 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 LRRN4Q8WUT4 740 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 STAMBPL1Q96FJ0 436 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 KLF6Q99612 283 aaPredicted RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 WDR83Q9BRX9 315 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 NSRP1Q9H0G5 558 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 MRPL47Q9HD33 250 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 NXF1Q9UBU9 619 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 LGALS13Q9UHV8 139 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 DNAJC25-GNG10A0A024R161 153 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 DNALI1O14645 258 aaPredicted RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 MAFO75444 373 aaPredicted RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 RPA3P35244 121 aaPredicted RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 RFC1P35251 1148 aaPredicted RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 SLC1A5Q15758 541 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 GALNTL6Q49A17 601 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 CELF3Q5SZQ8 465 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 CROCCP2Q86T23 111 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 ZC3H15Q8WU90 426 aaKnown RBP14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 MAIP1Q8WWC4 291 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 PRKAG3Q9UGI9 489 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 HMGXB4Q9UGU5 601 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
GTF2F1-201ENST00000394456 hCG_1818297A0A087WSY0 165 aa14.21□□□□□ -0.14
GTF2F1-201ENST00000394456 SGK1O00141 431 aa14.21□□□□□ -0.14
GTF2F1-201ENST00000394456 CDH16O75309 829 aa14.21□□□□□ -0.14
GTF2F1-201ENST00000394456 ASS1P00966 412 aaKnown RBP14.21□□□□□ -0.14
GTF2F1-201ENST00000394456 ALLCQ8N6M5 410 aa14.21□□□□□ -0.14
GTF2F1-201ENST00000394456 CNTN6Q9UQ52 1028 aa14.21□□□□□ -0.14
GTF2F1-201ENST00000394456 GOLGA8RI6L899 631 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 ADCY3O60266 1144 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 TXNP10599 105 aaKnown RBP14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 SSTR1P30872 391 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 MAN1A1P33908 653 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 GPX6P59796 221 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 PREPLQ4J6C6 727 aaPredicted RBP14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 PTPN20Q4JDL3 420 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 FNBP1LQ5T0N5 605 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 MAP1SQ66K74 1059 aaPredicted RBP14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 TRABD2AQ86V40 505 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 SLC10A4Q96EP9 437 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 MPHOSPH6Q99547 160 aaKnown RBP14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 PCSK1NQ9UHG2 260 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 IP6K2Q9UHH9 426 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 PLXNA1Q9UIW2 1896 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 ZBTB42B2RXF5 422 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 MSCO60682 206 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 PIGRP01833 764 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 RPSAP08865 295 aaKnown RBP14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 NQO1P15559 274 aaKnown RBP14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 CDKN2BP42772 138 aa14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 PDIA2Q13087 525 aaKnown RBP14.2□□□□□ -0.14
GTF2F1-201ENST00000394456 SNAPC2Q13487 334 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms