RNA–Protein interactions for RNA: ENST00000393283.5

RGPD5-203, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene RGPD5, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-203ENST00000393283 LPCAT4Q643R3 524 aa13.34□□□□□ -0.27
RGPD5-203ENST00000393283 RSAD2Q8WXG1 361 aa13.34□□□□□ -0.27
RGPD5-203ENST00000393283 FAM136AQ96C01 138 aa13.34□□□□□ -0.27
RGPD5-203ENST00000393283 DNAJC1Q96KC8 554 aaKnown RBP13.34□□□□□ -0.27
RGPD5-203ENST00000393283 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
RGPD5-203ENST00000393283 TRIM56Q9BRZ2 755 aaKnown RBP13.34□□□□□ -0.27
RGPD5-203ENST00000393283 COL20A1Q9P218 1284 aa13.34□□□□□ -0.27
RGPD5-203ENST00000393283 LOC100653049A0A140TA62 436 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 KRT34O76011 436 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 QARSP47897 775 aaKnown RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 PSMC5P62195 406 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 DEUP1Q05D60 604 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 TRAF1Q13077 416 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 SPP2Q13103 211 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 PTK7Q13308 1070 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 DMP1Q13316 513 aaPredicted RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 MAMLD1Q13495 774 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 WDR72Q3MJ13 1102 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 LRRC23Q53EV4 343 aaPredicted RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 RIPOR1Q6ZS17 1223 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 TREML1Q86YW5 311 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 RBM15BQ8NDT2 890 aaKnown RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 SLC26A7Q8TE54 656 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 EURLQ9NYK6 297 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 CLIC5Q9NZA1 410 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 UMODL1Q5DID0 1318 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 MAGEA13PA6NCF6 341 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 CIB2O75838 187 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 RAD17O75943 681 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 MTA2O94776 668 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 LMNAP02545 664 aaKnown RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 LYNP07948 512 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 INHBAP08476 426 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 NPTX2P47972 431 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 RTP1P59025 263 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 CENPCQ03188 943 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 KLF1Q13351 362 aaPredicted RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 MTMR1Q13613 665 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 UBAP2LQ14157 1087 aaKnown RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 AOC3Q16853 763 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 PRPF39Q86UA1 669 aaKnown RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 FAM71DQ8N9W8 422 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 GSTCDQ8NEC7 633 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 SERAC1Q96JX3 654 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 PPM1HQ9ULR3 514 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 CLUHO75153 1309 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 ATAD5Q96QE3 1844 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 PLIN4Q96Q06 1357 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 MAST2Q6P0Q8 1798 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 OR6B1O95007 311 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 ZWINTO95229 277 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 P4HBP07237 508 aaKnown RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 SLC25A3Q00325 362 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 LBRQ14739 615 aaKnown RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 SYDE1Q6ZW31 735 aaPredicted RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 PPP1R14CQ8TAE6 165 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 ACTL9Q8TC94 416 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 OXNAD1Q96HP4 312 aaPredicted RBP13.33□□□□□ -0.28
RGPD5-203ENST00000393283 TCHPQ9BT92 498 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 TMEM8AQ9HCN3 771 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 RHBDL2Q9NX52 303 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 ASB3Q9Y575 518 aa13.33□□□□□ -0.28
RGPD5-203ENST00000393283 MYPNQ86TC9 1320 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 PRPF4O43172 522 aaKnown RBP eCLIP13.32□□□□□ -0.28
RGPD5-203ENST00000393283 ZMPSTE24O75844 475 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 SPATA31D3P0C874 917 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 SCNN1BP51168 640 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 HIRAP54198 1017 aaPredicted RBP13.32□□□□□ -0.28
RGPD5-203ENST00000393283 WNT7BP56706 349 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 KBTBD12Q3ZCT8 623 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
RGPD5-203ENST00000393283 C6orf163Q5TEZ5 329 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 SPATA31D4Q6ZUB0 917 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 RASSF3Q86WH2 238 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 ZBTB45Q96K62 511 aaPredicted RBP13.32□□□□□ -0.28
RGPD5-203ENST00000393283 CALN1Q9BXU9 219 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 NDE1Q9NXR1 346 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 TBX20Q9UMR3 447 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 ACTL7BQ9Y614 415 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 E7ENQ6 273 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 CST8O60676 142 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 TCEA3O75764 348 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
RGPD5-203ENST00000393283 MUTP22033 750 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 SERPINB6P35237 376 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 CDK16Q00536 496 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 OTUD4Q01804 1114 aaKnown RBP13.32□□□□□ -0.28
RGPD5-203ENST00000393283 BTKQ06187 659 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 ARHGAP22Q7Z5H3 698 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 SLC9A9Q8IVB4 645 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 EMC1Q8N766 993 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 SMC1BQ8NDV3 1235 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 AGR3Q8TD06 166 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 BSNDQ8WZ55 320 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 SLCO2A1Q92959 643 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 EBF3Q9H4W6 596 aa13.32□□□□□ -0.28
RGPD5-203ENST00000393283 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms