RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 NLRP12P59046 1061 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 GNL2Q13823 731 aaKnown RBP23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 ZNF268Q14587 947 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 C9orf57Q5W0N0 161 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 KCNK18Q7Z418 384 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 TMEM150AQ86TG1 271 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 METTL23Q86XA0 190 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 THEM5Q8N1Q8 247 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 OGTO15294 1046 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 SPINK2P20155 84 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 DGKEP52429 567 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 RAD51AP2Q09MP3 1159 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 NBR1Q14596 966 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 USP39Q53GS9 565 aaKnown RBP23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 PMS2CLQ68D20 193 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 CPA6Q8N4T0 437 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 CCDC26Q8TAB7 109 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 GATA6Q92908 595 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 KCND2Q9NZV8 630 aa23.1■■□□□ 1.29
CNEP1R1-201ENST00000389134 PP2D1A8MPX8 630 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 LAD1O00515 517 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 PIRO00625 290 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 FAM189A1O60320 539 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 CDC25AP30304 524 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 NMT1P30419 496 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 LIG4P49917 911 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 TXNDC8Q6A555 127 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 JADE1Q6IE81 842 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 MON1AQ86VX9 555 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 FBXO18Q8NFZ0 1043 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 MRPS31Q92665 395 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 KCNN1Q92952 543 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 CD101Q93033 1021 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 FAM212AQ96EL1 285 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 MMTAG2Q9BU76 263 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 SCNM1Q9BWG6 230 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 ECT2Q9H8V3 914 aa23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 LARSQ9P2J5 1176 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-201ENST00000389134 CEP192Q8TEP8 1941 aa23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 SRRM3A6NNA2 597 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 CDX4O14627 284 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 HMGA1P17096 107 aaKnown RBP23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 U2AF2P26368 475 aaKnown RBP eCLIP23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 NCKAP1LP55160 1127 aa23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 ST3GAL1Q11201 340 aa23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 LRRTM3Q86VH5 581 aa23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 KCTD17Q8N5Z5 321 aa23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 SYT2Q8N9I0 419 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 ABI2Q9NYB9 513 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 DERAQ9Y315 318 aa23.08■■□□□ 1.29
CNEP1R1-201ENST00000389134 ANO9A1A5B4 782 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 CYB561D2O14569 222 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 HNRNPDLO14979 420 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 TOP3BO95985 862 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 CSH1P0DML2 217 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 CSH2P0DML3 217 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 SCP2P22307 547 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 PRPHP41219 470 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 CDR1P51861 262 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 NEK4P51957 841 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 PSMD2Q13200 908 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 NAIF1Q69YI7 327 aaPredicted RBP23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 DTHD1Q6ZMT9 781 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 CYP2U1Q7Z449 544 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 DCP1BQ8IZD4 617 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 TSTD1Q8NFU3 115 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 RIN3Q8TB24 985 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 DUS2Q9NX74 493 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 HELZP42694 1942 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 MYOFQ9NZM1 2061 aa23.07■■□□□ 1.28
CNEP1R1-201ENST00000389134 TNRC6BQ9UPQ9 1833 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 PIGRP01833 764 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 MTF1Q14872 753 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 TMEM132DQ14C87 1099 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 ZRSR1Q15695 479 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 OSCP1Q8WVF1 389 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 EZH1Q92800 747 aaPredicted RBP23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 ATP2A3Q93084 1043 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 PYM1Q9BRP8 204 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 CPSF3Q9UKF6 684 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 INVSQ9Y283 1065 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 PCDHB6Q9Y5E3 794 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 PCDHB5Q9Y5E4 795 aa23.06■■□□□ 1.28
CNEP1R1-201ENST00000389134 A0A0B4J269 797 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 NFICP08651 508 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 TAF6P49848 677 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 IRX4P78413 519 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 FAM160A1Q05DH4 1040 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 NR1H3Q13133 447 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 IL17AQ16552 155 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 HYIQ5T013 277 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 LRSAM1Q6UWE0 723 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 ZCCHC14Q8WYQ9 949 aaKnown RBP23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 LLPHQ9BRT6 129 aaKnown RBP23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 MSTO1Q9BUK6 570 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 CCSER1Q9C0I3 900 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 UXTQ9UBK9 157 aaPredicted RBP23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 MAGED2Q9UNF1 606 aaPredicted RBP23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 PLXND1Q9Y4D7 1925 aa23.05■■□□□ 1.28
CNEP1R1-201ENST00000389134 IFNAR2P48551 515 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms