RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SMG5Q9UPR3 1016 aaKnown RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 PRDX5P30044 214 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 GRAPQ13588 217 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 PDCD4Q53EL6 469 aaKnown RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 PKN3Q6P5Z2 889 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 PIGBQ92521 554 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 GAS2O43903 313 aaKnown RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 TRPV5Q9NQA5 729 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 BTBD3Q9Y2F9 522 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ARAP3Q8WWN8 1544 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ADGRA2Q96PE1 1338 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 TRIP4Q15650 581 aaPredicted RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 POLNQ7Z5Q5 900 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 SLC25A41Q8N5S1 370 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 PHC3Q8NDX5 983 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 STK32AQ8WU08 396 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 DHX38Q92620 1227 aaKnown RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 VPS39Q96JC1 886 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 PIGUQ9H490 435 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 A1CFQ9NQ94 594 aaKnown RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 TOPORSQ9NS56 1045 aaPredicted RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 HOXC10Q9NYD6 342 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ADAM30Q9UKF2 790 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 MAP3K13O43283 966 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ZBED6P86452 979 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ALFQ53S48 1182 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 SNF8Q96H20 258 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF512Q96ME7 567 aaPredicted RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ZSWIM5Q9P217 1185 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 PFDN2Q9UHV9 154 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 GTF2A1LQ9UNN4 478 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 SSH2Q76I76 1423 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 MTSS1O43312 755 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 B3GALNT1O75752 331 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 IGFBP4P22692 258 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 FASTKD1Q53R41 847 aaKnown RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF212Q9UDV6 495 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 SNX24Q9Y343 169 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 GPATCH8Q9UKJ3 1502 aaKnown RBP11.21□□□□□ -0.61
CLCN4-202ENST00000380833 KIAA0556O60303 1618 aa11.21□□□□□ -0.61
CLCN4-202ENST00000380833 NPHP3-ACAD11A0A0J9YXS1 232 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 GRAP2O75791 330 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 SLC9A3P48764 834 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 RHAGQ02094 409 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 GTF2H3Q13889 308 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 LVRNQ6Q4G3 990 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 PCDH12Q9NPG4 1184 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 CROTQ9UKG9 612 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 APOL3O95236 402 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 ALDH1A1P00352 501 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 CYBBP04839 570 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 DNAJB2P25686 324 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 TRAF2Q12933 501 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 TRIQKQ629K1 86 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 TSSK1BQ9BXA7 367 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 ELOVL6Q9H5J4 265 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 ADAM22Q9P0K1 906 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF221Q9UK13 617 aa11.21□□□□□ -0.62
CLCN4-202ENST00000380833 TRIM49BA6NDI0 452 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 CHRNA3P32297 505 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 RAB27AP51159 221 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 AMHR2Q16671 573 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 GSTA3Q16772 222 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 C10orf53Q8N6V4 93 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 OSCP1Q8WVF1 389 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ZIM3Q96PE6 472 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PLEKHG4BQ96PX9 1271 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF184Q99676 751 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ENTPD7Q9NQZ7 604 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ING4Q9UNL4 249 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 F8W8V4 182 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 MAPRE1Q15691 268 aaKnown RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 KRT39Q6A163 491 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 CCDC36Q8IYA8 594 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 DQX1Q8TE96 717 aaKnown RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 S100ZQ8WXG8 99 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 TMEM161AQ9NX61 479 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 SULT1E1P49888 294 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PDZK1Q5T2W1 519 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 V9GYQ6 96 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 UGGT2Q9NYU1 1516 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 FAM187AA6NFU0 413 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 UBXN8O00124 270 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 TEX28O15482 410 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PHGDHO43175 533 aaKnown RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 TXNP10599 105 aaKnown RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 SOAT1P35610 550 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 TWF1Q12792 350 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 GRSF1Q12849 480 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 COX10Q12887 443 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms