RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 IGFLR1Q9H665 355 aa13.5□□□□□ -0.25
SMN1-202ENST00000380707 PCDHB4Q9Y5E5 795 aa13.5□□□□□ -0.25
SMN1-202ENST00000380707 FOXN3O00409 490 aaPredicted RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 VNN2O95498 520 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 TPM3P06753 285 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 CPB1P15086 417 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 RAD23BP54727 409 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 POLR2FP61218 127 aaKnown RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 YWHAEP62258 255 aaKnown RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 HYAL1Q12794 435 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 RAPGEF1Q13905 1077 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 FAM171BQ6P995 826 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 LILRA6Q6PI73 481 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 CRYBG2Q8N1P7 616 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 MICALL1Q8N3F8 863 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 SLC4A11Q8NBS3 891 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 B3GALNT2Q8NCR0 500 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 SHC3Q92529 594 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 TMEM176AQ96HP8 235 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 PGLYRP2Q96PD5 576 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 NLRC4Q9NPP4 1024 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 PNMA6AP0CW24 399 aaPredicted RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 FOSL2P15408 326 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 EPCAMP16422 314 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 TRIM21P19474 475 aaKnown RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 RFX1P22670 979 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 ZNF132P52740 706 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 ADCY1Q08828 1119 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 KCNC3Q14003 757 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 DRAP1Q14919 205 aaPredicted RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 MDH1BQ5I0G3 518 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 LLGL2Q6P1M3 1020 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 DCP1BQ8IZD4 617 aaKnown RBP13.49□□□□□ -0.25
SMN1-202ENST00000380707 ATAD1Q8NBU5 361 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 VN1R2Q8NFZ6 395 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 MYCBPAPQ8TBZ2 947 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 SLC22A17Q8WUG5 538 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 TNIP3Q96KP6 325 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 STK33Q9BYT3 514 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 HCFC2Q9Y5Z7 792 aa13.49□□□□□ -0.25
SMN1-202ENST00000380707 MTMR11A4FU01 709 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 SEC24AO95486 1093 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 GLUD1P00367 558 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 CALCAP01258 141 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 KRT5P13647 590 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 ATF2P15336 505 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 USP8P40818 1118 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 JAM2P57087 298 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 TPGS2Q68CL5 300 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 FAM71AQ8IYT1 594 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 RBBP8NLQ8NC74 664 aaPredicted RBP13.48□□□□□ -0.25
SMN1-202ENST00000380707 PCED1BQ96HM7 432 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 HEXIM2Q96MH2 286 aaKnown RBP13.48□□□□□ -0.25
SMN1-202ENST00000380707 CDCA3Q99618 268 aaPredicted RBP13.48□□□□□ -0.25
SMN1-202ENST00000380707 TTYH3Q9C0H2 523 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 CRISPLD1Q9H336 500 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 ACP6Q9NPH0 428 aa13.48□□□□□ -0.25
SMN1-202ENST00000380707 AFF4Q9UHB7 1163 aaKnown RBP13.48□□□□□ -0.25
SMN1-202ENST00000380707 F8VZ95 297 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 LINC01565O15544 149 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 C1RP00736 705 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 ZNF75DP51815 510 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 DUSP4Q13115 394 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 CCDC85BQ15834 202 aaPredicted RBP13.47□□□□□ -0.25
SMN1-202ENST00000380707 NFE2Q16621 373 aaPredicted RBP13.47□□□□□ -0.25
SMN1-202ENST00000380707 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 TTC9BQ8N6N2 239 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 EFHBQ8N7U6 833 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 B3GNT5Q9BYG0 378 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 RHOBTB2Q9BYZ6 727 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 FAM49BQ9NUQ9 324 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 ABI2Q9NYB9 513 aaPredicted RBP13.47□□□□□ -0.25
SMN1-202ENST00000380707 CEP72Q9P209 647 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 FBXW11Q9UKB1 542 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 SLC27A5Q9Y2P5 690 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 DAAM1Q9Y4D1 1078 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 PLXNA3P51805 1871 aa13.47□□□□□ -0.25
SMN1-202ENST00000380707 FSD2A1L4K1 749 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 HAX1O00165 279 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 CLDN5O00501 218 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 CYP26A1O43174 497 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 GLP2RO95838 553 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 PAEPP09466 180 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 CCDC130P13994 396 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 CYP2F1P24903 491 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 CLCN1P35523 988 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 ADAM15Q13444 863 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 MAPRE1Q15691 268 aaKnown RBP13.46□□□□□ -0.25
SMN1-202ENST00000380707 FIGNQ5HY92 759 aa13.46□□□□□ -0.25
SMN1-202ENST00000380707 PPP1R26Q5T8A7 1209 aaPredicted RBP13.46□□□□□ -0.25
SMN1-202ENST00000380707 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms