RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 LRRC43Q8N309 656 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 TCP10LQ8TDR4 215 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 PYROXD1Q8WU10 500 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 NAT14Q8WUY8 206 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 BTBD6Q96KE9 485 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 TIMMDC1Q9NPL8 285 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 CNTN3Q9P232 1028 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 ZNF180Q9UJW8 692 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 PLA2G4CQ9UP65 541 aa8.62□□□□□ -1.03
PTPRR-203ENST00000378778 MYPNQ86TC9 1320 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 SFI1A8K8P3 1242 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 BIRC5O15392 142 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 BBOX1O75936 387 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 RAB15P59190 212 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 DLG4P78352 724 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 MED21Q13503 144 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 TRIP13Q15645 432 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 STXBP5Q5T5C0 1151 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 KLC3Q6P597 504 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 MAEAQ7L5Y9 396 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 POLNQ7Z5Q5 900 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 PDSS2Q86YH6 399 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 LINC00116Q8NCU8 138 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 RFWD2Q8NHY2 731 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 DGCR14Q96DF8 476 aaKnown RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 NLRP4Q96MN2 994 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 Q9H521 79 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 PARVAQ9NVD7 372 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 ZNF148Q9UQR1 794 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 JAG2Q9Y219 1238 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 COL2A1P02458 1487 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 A0A0G2JND7 137 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 H0YCG3 227 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 CASQ2O14958 399 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 PLSCR1O15162 318 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 LPXNO60711 386 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 P4HBP07237 508 aaKnown RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 UQCRBP14927 111 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 ADRA1DP25100 572 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 SERPINB3P29508 390 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 WASHC5Q12768 1159 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 PDIA2Q13087 525 aaKnown RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 GPS1Q13098 491 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 R3HDM1Q15032 1099 aaKnown RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 CEP55Q53EZ4 464 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 BORAQ6PGQ7 559 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 IZUMO2Q6UXV1 221 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 ZBED8Q8IZ13 594 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 DAW1Q8N136 415 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 SAMD3Q8N6K7 520 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 NIPA2Q8N8Q9 360 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 CATSPER1Q8NEC5 780 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 FAM172AQ8WUF8 416 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 DCAKDQ8WVC6 231 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 KCNN1Q92952 543 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 MTBPQ96DY7 904 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 HIC2Q96JB3 615 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 SLITRK1Q96PX8 696 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 PAFAH2Q99487 392 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 SENP7Q9BQF6 1050 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 COA1Q9GZY4 146 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 DHX33Q9H6R0 707 aaKnown RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 C1orf112Q9NSG2 853 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 DNAJC17Q9NVM6 304 aaKnown RBP8.61□□□□□ -1.03
PTPRR-203ENST00000378778 PADI4Q9UM07 663 aa8.61□□□□□ -1.03
PTPRR-203ENST00000378778 B2RBV5 119 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 HGSO14964 777 aaPredicted RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 CCNT2O60583 730 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 PLA2G6O60733 806 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 UFL1O94874 794 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 KLHL2O95198 593 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 SERPINA6P08185 405 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 BMP3P12645 472 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 AOC1P19801 751 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 GARTP22102 1010 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 ACAT1P24752 427 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 RTP1P59025 263 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 CDC16Q13042 620 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 SNRNP35Q16560 246 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 NSMFQ6X4W1 530 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 ARCQ7LC44 396 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 OR6Y1Q8NGX8 325 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 FEZF2Q8TBJ5 459 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 WDR60Q8WVS4 1066 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 FAM161BQ96MY7 647 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 CNTN6Q9UQ52 1028 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 IKBKGQ9Y6K9 419 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 SIPA1L1O43166 1804 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 A0A1W2PPM1 405 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 MAP3K13O43283 966 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 FAM189A1O60320 539 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 CALB1P05937 261 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 VIL1P09327 827 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 POLR2MP0CAP2 368 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 EEF2P13639 858 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 PRDX6P30041 224 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms