RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 RFPL2O75678 378 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 ATP1A3P13637 1013 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 SLC9A1P19634 815 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 PON1P27169 355 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 COPB1P53618 953 aaKnown RBP19.99■□□□□ 0.79
SSU72-203ENST00000378725 MAPRE1Q15691 268 aaKnown RBP19.99■□□□□ 0.79
SSU72-203ENST00000378725 AAK1Q2M2I8 961 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 PUS10Q3MIT2 529 aaKnown RBP19.99■□□□□ 0.79
SSU72-203ENST00000378725 PPM1LQ5SGD2 360 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 RARS2Q5T160 578 aaKnown RBP19.99■□□□□ 0.79
SSU72-203ENST00000378725 PHLDB3Q6NSJ2 640 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 TRIM65Q6PJ69 517 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 GPR149Q86SP6 731 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 UBR7Q8N806 425 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 B3GALNT2Q8NCR0 500 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 SUSD6Q92537 303 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 ZNF707Q96C28 371 aaPredicted RBP19.99■□□□□ 0.79
SSU72-203ENST00000378725 TNIP3Q96KP6 325 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 ARID3AQ99856 593 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 PRKD2Q9BZL6 878 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 DPEP3Q9H4B8 488 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 ABCB6Q9NP58 842 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 CISHQ9NSE2 258 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 PCDHB5Q9Y5E4 795 aa19.99■□□□□ 0.79
SSU72-203ENST00000378725 PRRG1O14668 218 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 MBTPS2O43462 519 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 TPM2P07951 284 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 TUFMP49411 452 aaKnown RBP19.98■□□□□ 0.79
SSU72-203ENST00000378725 PSMC1P62191 440 aaKnown RBP19.98■□□□□ 0.79
SSU72-203ENST00000378725 GCNT1Q02742 428 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 KCNMA1Q12791 1236 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 SMAD4Q13485 552 aaKnown RBP19.98■□□□□ 0.79
SSU72-203ENST00000378725 CLUL1Q15846 466 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 CFAP221Q4G0U5 840 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 DPY19L2P1Q6NXN4 242 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 TMC5Q6UXY8 1006 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 LUZP1Q86V48 1076 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 ARHGEF19Q8IW93 802 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 FAM200AQ8TCP9 573 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 FUBP3Q96I24 572 aaKnown RBP eCLIP19.98■□□□□ 0.79
SSU72-203ENST00000378725 APOL5Q9BWW9 433 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 TSPY26PQ9H489 355 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 HMGXB4Q9UGU5 601 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 SLC27A5Q9Y2P5 690 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 INSL5Q9Y5Q6 135 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 REV3LO60673 3130 aa19.98■□□□□ 0.79
SSU72-203ENST00000378725 GRXCR2A6NFK2 248 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 SPDYE4A6NLX3 237 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 HAPLN1P10915 354 aaPredicted RBP19.97■□□□□ 0.79
SSU72-203ENST00000378725 CD58P19256 250 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 YWHAEP62258 255 aaKnown RBP19.97■□□□□ 0.79
SSU72-203ENST00000378725 MRPS5P82675 430 aaKnown RBP19.97■□□□□ 0.79
SSU72-203ENST00000378725 CCDC142Q17RM4 750 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 CES5AQ6NT32 575 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 C4orf50Q6ZRC1 276 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 RRAGAQ7L523 313 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 ACOT1Q86TX2 421 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 PPM1KQ8N3J5 372 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 FEZF2Q8TBJ5 459 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 JAKMIP2Q96AA8 810 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 PCED1BQ96HM7 432 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 TWNKQ96RR1 684 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 LPIN3Q9BQK8 851 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 NT5C1AQ9BXI3 368 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 ELOVL4Q9GZR5 314 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 SIX2Q9NPC8 291 aa19.97■□□□□ 0.79
SSU72-203ENST00000378725 ABI2Q9NYB9 513 aaPredicted RBP19.97■□□□□ 0.79
SSU72-203ENST00000378725 ACO1P21399 889 aaKnown RBP19.96■□□□□ 0.79
SSU72-203ENST00000378725 MDH1BQ5I0G3 518 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 ATAT1Q5SQI0 421 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 SMYD5Q6GMV2 418 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 SPATA2LQ8IUW3 424 aaPredicted RBP19.96■□□□□ 0.79
SSU72-203ENST00000378725 TTC9BQ8N6N2 239 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 KAT5Q92993 513 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 MYLPFQ96A32 169 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 FAM81BQ96LP2 452 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 KREMEN1Q96MU8 473 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 UBE2TQ9NPD8 197 aaPredicted RBP19.96■□□□□ 0.79
SSU72-203ENST00000378725 USP15Q9Y4E8 981 aaPredicted RBP19.96■□□□□ 0.79
SSU72-203ENST00000378725 YIPF1Q9Y548 306 aa19.96■□□□□ 0.79
SSU72-203ENST00000378725 LGALS16A8MUM7 142 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 PES1O00541 588 aaKnown RBP19.95■□□□□ 0.78
SSU72-203ENST00000378725 CYP2F1P24903 491 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 MAGEA11P43364 429 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 CDR1P51861 262 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 RAD23BP54727 409 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 TWF1Q12792 350 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 SMAD2Q15796 467 aaKnown RBP19.95■□□□□ 0.78
SSU72-203ENST00000378725 PTCRAQ6ISU1 281 aaPredicted RBP19.95■□□□□ 0.78
SSU72-203ENST00000378725 ENOSF1Q7L5Y1 443 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 SMG7Q92540 1137 aaKnown RBP19.95■□□□□ 0.78
SSU72-203ENST00000378725 TMEM176AQ96HP8 235 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 RIPOR3Q96MK2 946 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 ASB2Q96Q27 587 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 B3GNT5Q9BYG0 378 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 DNAI2Q9GZS0 605 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 APEX2Q9UBZ4 518 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 CNTN6Q9UQ52 1028 aa19.95■□□□□ 0.78
SSU72-203ENST00000378725 MTCL1Q9Y4B5 1905 aaKnown RBP19.95■□□□□ 0.78
SSU72-203ENST00000378725 CCL16O15467 120 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms