RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 MDH1BQ5I0G3 518 aa23.42■■□□□ 1.34
GFRA3-202ENST00000378362 SMOC2Q9H3U7 446 aa23.42■■□□□ 1.34
GFRA3-202ENST00000378362 VRTNQ9H8Y1 702 aa23.42■■□□□ 1.34
GFRA3-202ENST00000378362 ATF6P18850 670 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 CD58P19256 250 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 FSHRP23945 695 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 PCSK1P29120 753 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 DDR2Q16832 855 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 FRMD5Q7Z6J6 570 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 ARID3AQ99856 593 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 RAB20Q9NX57 234 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 PCDHB5Q9Y5E4 795 aa23.41■■□□□ 1.34
GFRA3-202ENST00000378362 TACC1O75410 805 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 PAPLNO95428 1278 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 ALDH1A3P47895 512 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 MCCD1P59942 119 aaPredicted RBP23.4■■□□□ 1.34
GFRA3-202ENST00000378362 CYP27A1Q02318 531 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 TDRD5Q8NAT2 981 aaKnown RBP23.4■■□□□ 1.34
GFRA3-202ENST00000378362 FBXL13Q8NEE6 735 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 FAM200AQ8TCP9 573 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 RSAD2Q8WXG1 361 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 MYLPFQ96A32 169 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 ZNF512Q96ME7 567 aaPredicted RBP23.4■■□□□ 1.34
GFRA3-202ENST00000378362 NR2E1Q9Y466 385 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 CLDN5O00501 218 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 MBD3O95983 291 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 MYL4P12829 197 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 PTPN2P17706 415 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 GTF2H1P32780 548 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 CAVIN1Q6NZI2 390 aaKnown RBP23.4■■□□□ 1.34
GFRA3-202ENST00000378362 FAM171BQ6P995 826 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 IRF2BP1Q8IU81 584 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 EPHX3Q9H6B9 360 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 CDH9Q9ULB4 789 aa23.4■■□□□ 1.34
GFRA3-202ENST00000378362 HAPLN1P10915 354 aaPredicted RBP23.39■■□□□ 1.33
GFRA3-202ENST00000378362 BDNFP23560 247 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 FMO5P49326 533 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 MTMR3Q13615 1198 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 RBM43Q6ZSC3 357 aaKnown RBP23.39■■□□□ 1.33
GFRA3-202ENST00000378362 ACOT1Q86TX2 421 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 SPATA2LQ8IUW3 424 aaPredicted RBP23.39■■□□□ 1.33
GFRA3-202ENST00000378362 GPIHBP1Q8IV16 184 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 PCED1BQ96HM7 432 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 TWNKQ96RR1 684 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 IMPG2Q9BZV3 1241 aa23.39■■□□□ 1.33
GFRA3-202ENST00000378362 METTL14Q9HCE5 456 aaKnown RBP23.39■■□□□ 1.33
GFRA3-202ENST00000378362 ZNF334Q9HCZ1 680 aaPredicted RBP23.39■■□□□ 1.33
GFRA3-202ENST00000378362 MRPS23Q9Y3D9 190 aaKnown RBP23.39■■□□□ 1.33
GFRA3-202ENST00000378362 CEBPBP17676 345 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 PTPN1P18031 435 aaKnown RBP23.38■■□□□ 1.33
GFRA3-202ENST00000378362 NDST1P52848 882 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 TPD52L1Q16890 204 aaPredicted RBP23.38■■□□□ 1.33
GFRA3-202ENST00000378362 OTOP3Q7RTS5 596 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 SCN4BQ8IWT1 228 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 ELMOD1Q8N336 334 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 FGF13Q92913 245 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 CNOT6LQ96LI5 555 aaKnown RBP23.38■■□□□ 1.33
GFRA3-202ENST00000378362 CACNA2D1P54289 1103 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 EPHB3P54753 998 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 ENPEPQ07075 957 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 ZNF394Q53GI3 561 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 CCDC183Q5T5S1 534 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 IQCEQ6IPM2 695 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 CYP26C1Q6V0L0 522 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 C11orf57Q6ZUT1 292 aaPredicted RBP23.38■■□□□ 1.33
GFRA3-202ENST00000378362 DNAJB7Q7Z6W7 309 aaPredicted RBP23.38■■□□□ 1.33
GFRA3-202ENST00000378362 TRIM59Q8IWR1 403 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 C12orf29Q8N999 325 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 SPPL2BQ8TCT7 592 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 ACSF2Q96CM8 615 aaPredicted RBP23.38■■□□□ 1.33
GFRA3-202ENST00000378362 MCRS1Q96EZ8 462 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 TMEM30AQ9NV96 361 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 MYH10P35580 1976 aa23.38■■□□□ 1.33
GFRA3-202ENST00000378362 STX10O60499 249 aa23.37■■□□□ 1.33
GFRA3-202ENST00000378362 KCNH2Q12809 1159 aa23.37■■□□□ 1.33
GFRA3-202ENST00000378362 NFE2Q16621 373 aaPredicted RBP23.37■■□□□ 1.33
GFRA3-202ENST00000378362 B3GALNT2Q8NCR0 500 aa23.37■■□□□ 1.33
GFRA3-202ENST00000378362 TAF4BQ92750 862 aa23.37■■□□□ 1.33
GFRA3-202ENST00000378362 NIF3L1Q9GZT8 377 aa23.37■■□□□ 1.33
GFRA3-202ENST00000378362 MAGED2Q9UNF1 606 aaPredicted RBP23.37■■□□□ 1.33
GFRA3-202ENST00000378362 P4HA1P13674 534 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 TUFMP49411 452 aaKnown RBP23.36■■□□□ 1.33
GFRA3-202ENST00000378362 FOXR2Q6PJQ5 311 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 PDZD4Q76G19 769 aaPredicted RBP23.36■■□□□ 1.33
GFRA3-202ENST00000378362 MYCBPAPQ8TBZ2 947 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 SPATA18Q8TC71 538 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 RPP25Q9BUL9 199 aaKnown RBP23.36■■□□□ 1.33
GFRA3-202ENST00000378362 BCO2Q9BYV7 579 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 ZNF518BQ9C0D4 1074 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 SAMSN1Q9NSI8 373 aaKnown RBP23.36■■□□□ 1.33
GFRA3-202ENST00000378362 MAFFQ9ULX9 164 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 USTQ9Y2C2 406 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.36■■□□□ 1.33
GFRA3-202ENST00000378362 ZDBF2Q9HCK1 2354 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 TECTAO75443 2155 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 LAMP2P13473 410 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 STXBP5Q5T5C0 1151 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 RTL10Q7L3V2 364 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 CCDC150Q8NCX0 1101 aa23.36■■□□□ 1.33
GFRA3-202ENST00000378362 ZSWIM3Q96MP5 696 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms