RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 SLC7A8Q9UHI5 535 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 HARSP12081 509 aaKnown RBP16.66■□□□□ 0.26
CKAP4-201ENST00000378026 LMNB2Q03252 620 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 TXNRD3NBQ6F5E7 133 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
CKAP4-201ENST00000378026 ARHGAP18Q8N392 663 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 CERS5Q8N5B7 392 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 ARHGEF1Q92888 912 aaKnown RBP16.66■□□□□ 0.26
CKAP4-201ENST00000378026 MTBPQ96DY7 904 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 SERAC1Q96JX3 654 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 DNAJC1Q96KC8 554 aaKnown RBP16.66■□□□□ 0.26
CKAP4-201ENST00000378026 FOXP3Q9BZS1 431 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 RHBDL2Q9NX52 303 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 GALNT8Q9NY28 637 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 ZNF335Q9H4Z2 1342 aaPredicted RBP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 MORF4L2Q15014 288 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 MARK2Q7KZI7 788 aaKnown RBP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 PRPF39Q86UA1 669 aaKnown RBP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 SATL1Q86VE3 508 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 KATNAL2Q8IYT4 538 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 ST13P4Q8IZP2 240 aaPredicted RBP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 GSTCDQ8NEC7 633 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 EXD1Q8NHP7 514 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 USP6NLQ92738 828 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 RILPQ96NA2 401 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 CHMP2BQ9UQN3 213 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 HNRNPRO43390 633 aaKnown RBP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 PSTPIP1O43586 416 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 PHBP35232 272 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 TMPRSS6Q8IU80 811 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 JDP2Q8WYK2 163 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 IWS1Q96ST2 819 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 MMADHCQ9H3L0 296 aaPredicted RBP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
CKAP4-201ENST00000378026 IVNS1ABPQ9Y6Y0 642 aa16.65■□□□□ 0.26
CKAP4-201ENST00000378026 TCRBV7S3A2A0A539 114 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 CCDC160A6NGH7 325 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 PGM3O95394 542 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 ATP2B4P23634 1241 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 NRLP54845 237 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 INHBCP55103 352 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 USP46P62068 366 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 MAMLD1Q13495 774 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 PRKD1Q15139 912 aaPredicted RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 CEP55Q53EZ4 464 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 FAM102BQ5T8I3 360 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 SESTD1Q86VW0 696 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 HIC2Q96JB3 615 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 ZWILCHQ9H900 591 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 IKBKGQ9Y6K9 419 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 DDTLA6NHG4 134 aaPredicted RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 TM9SF1O15321 606 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 GRIA2P42262 883 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 GDF10P55107 478 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 FAAP100Q0VG06 881 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 MYBPC2Q14324 1141 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 KRT72Q14CN4 511 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 DOK7Q18PE1 504 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 ADGRD1Q6QNK2 874 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 MIER3Q7Z3K6 550 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 ATP11CQ8NB49 1132 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 FAM81BQ96LP2 452 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 ACAP3Q96P50 834 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 TEKT3Q9BXF9 490 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 SHCBP1LQ9BZQ2 653 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 TMEM8AQ9HCN3 771 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 CHCHD3Q9NX63 227 aaKnown RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 DDX43Q9NXZ2 648 aaKnown RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 ATXN10Q9UBB4 475 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 SPECC1L-ADORA2AF8WAN1 911 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 DNAJC6O75061 913 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 PTK7Q13308 1070 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 SPATA24Q86W54 205 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 CCDC124Q96CT7 223 aaKnown RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 DTNBP1Q96EV8 351 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 MPP4Q96JB8 637 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 FAM210AQ96ND0 272 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.25
CKAP4-201ENST00000378026 IQCGQ9H095 443 aaKnown RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 AVENQ9NQS1 362 aaPredicted RBP16.64■□□□□ 0.25
CKAP4-201ENST00000378026 FAM155BO75949 473 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 SORBS2O94875 1100 aaKnown RBP16.63■□□□□ 0.25
CKAP4-201ENST00000378026 GPC3P51654 580 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 EPHB1P54762 984 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 UBAP2LQ14157 1087 aaKnown RBP16.63■□□□□ 0.25
CKAP4-201ENST00000378026 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 EFCAB3Q8N7B9 438 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 DCAKDQ8WVC6 231 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 PPP2R3CQ969Q6 453 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 WDR83Q9BRX9 315 aaKnown RBP16.63■□□□□ 0.25
CKAP4-201ENST00000378026 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 F8VP50 259 aa16.63■□□□□ 0.25
CKAP4-201ENST00000378026 RAP1GDS1P52306 607 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms