RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 FAM71AQ8IYT1 594 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 CEP120Q8N960 986 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 GSDMBQ8TAX9 411 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 ZIM3Q96PE6 472 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 FUT8Q9BYC5 575 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 WRAP73Q9P2S5 460 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-202ENST00000377797 NEU2Q9Y3R4 380 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 KRT38O76015 456 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 ICAM3P32942 547 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 STMN2Q93045 179 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 ANKZF1Q9H8Y5 726 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 FRMD3A2A2Y4 597 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 AP1G2O75843 785 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 GHRP10912 638 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 SKIP12755 728 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 NCAM1P13591 858 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 RASSF2P50749 326 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 KYNUQ16719 465 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 SDCCAG8Q86SQ7 713 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-202ENST00000377797 SMC1BQ8NDV3 1235 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 ITGA8P53708 1063 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 CREG2Q8IUH2 290 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 LNX1Q8TBB1 728 aaPredicted RBP15.21■□□□□ 0.03
TCOF1-202ENST00000377797 FSD1LQ9BXM9 530 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.03
TCOF1-202ENST00000377797 RECQL4O94761 1208 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 NR1H3Q13133 447 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 HES2Q9Y543 173 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 TRPA1O75762 1119 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 BCAT1P54687 386 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 EPM2AIP1Q7L775 607 aaPredicted RBP15.21■□□□□ 0.03
TCOF1-202ENST00000377797 BTAF1O14981 1849 aa15.21■□□□□ 0.03
TCOF1-202ENST00000377797 PGK1P00558 417 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 GLI1P08151 1106 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 ODC1P11926 461 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 SPARCL1Q14515 664 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 TRMT10CQ7L0Y3 403 aaKnown RBP15.21■□□□□ 0.02
TCOF1-202ENST00000377797 TRIM42Q8IWZ5 723 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 VCPIP1Q96JH7 1222 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 GCNAQ96QF7 691 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 SPON2Q9BUD6 331 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 DHX33Q9H6R0 707 aaKnown RBP15.21■□□□□ 0.02
TCOF1-202ENST00000377797 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.21■□□□□ 0.02
TCOF1-202ENST00000377797 RBPJLQ9UBG7 517 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 STK38LQ9Y2H1 464 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 NWD2Q9ULI1 1742 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 MROH7Q68CQ1 1323 aa15.21■□□□□ 0.02
TCOF1-202ENST00000377797 CIB2O75838 187 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 RPLP2P05387 115 aaKnown RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 NOVP48745 357 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 EPHB1P54762 984 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 SMAD1Q15797 465 aaKnown RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 DCP1BQ8IZD4 617 aaKnown RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 STARD7Q9NQZ5 370 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 OPLAHO14841 1288 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 BNIP3LO60238 219 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 TLR2O60603 784 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 NFICP08651 508 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 HIRAP54198 1017 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 DMTNQ08495 405 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 STAT4Q14765 748 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 DUSP28Q4G0W2 176 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 EFCAB13Q8IY85 973 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 ARRDC4Q8NCT1 418 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 RAB3IL1Q8TBN0 382 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 MFSD14AQ96MC6 490 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 AGAP3Q96P47 875 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 CNPY3Q9BT09 278 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 ARHGAP28Q9P2N2 729 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 A0A0B4J269 797 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 CASTOR2A6NHX0 329 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 COPEO14579 308 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 SESN2P58004 480 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 ITPRIPL1Q6GPH6 555 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 HASPINQ8TF76 798 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 TTC17Q96AE7 1141 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 ELAC2Q9BQ52 826 aaKnown RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 MAF1Q9H063 256 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 ST6GALNAC4Q9H4F1 302 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 MAP3K6O95382 1288 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 SMIM10L2AP0DMW4 78 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 SMIM10L2BP0DMW5 78 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 TFDP3Q5H9I0 405 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 MTHFD1LQ6UB35 978 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 APTXQ7Z2E3 356 aaKnown RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 HDAC7Q8WUI4 952 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 ABI2Q9NYB9 513 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 BAIAP2L1Q9UHR4 511 aa15.2■□□□□ 0.02
TCOF1-202ENST00000377797 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 MARF1Q9Y4F3 1742 aaKnown RBP15.2■□□□□ 0.02
TCOF1-202ENST00000377797 CFAP69A5D8W1 941 aa15.19■□□□□ 0.02
TCOF1-202ENST00000377797 ZSCAN5CA6NGD5 496 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-202ENST00000377797 M0QYT0 321 aa15.19■□□□□ 0.02
TCOF1-202ENST00000377797 NOL4O94818 638 aa15.19■□□□□ 0.02
TCOF1-202ENST00000377797 KCNA3P22001 575 aa15.19■□□□□ 0.02
TCOF1-202ENST00000377797 VEPH1Q14D04 833 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms