RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 PPP1R26Q5T8A7 1209 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 KIAA0319Q5VV43 1072 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 PRSS55Q6UWB4 352 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 ANKS3Q6ZW76 656 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 TDHQ8IZJ6 230 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 VPS52Q8N1B4 723 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 OR10T2Q8NGX3 314 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 LNX1Q8TBB1 728 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CYFIP2Q96F07 1278 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 ZSWIM1Q9BR11 485 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 GTF3C4Q9UKN8 822 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 EPN1Q9Y6I3 576 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
CBWD3-203ENST00000377344 MYBPHLA2RUH7 354 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 H7C4K7 107 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 DDX3XO00571 662 aaKnown RBP eCLIP13.75□□□□□ -0.21
CBWD3-203ENST00000377344 ARHGEF15O94989 841 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 CSPG5O95196 566 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 DNAJB2P25686 324 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 ADORA2BP29275 332 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 BMP8BP34820 402 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 GLUD2P49448 558 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 ARPP19P56211 112 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 CYP27A1Q02318 531 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 SPA17Q15506 151 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 SLC18A3Q16572 532 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 ASTE1Q2TB18 679 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-203ENST00000377344 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
CBWD3-203ENST00000377344 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 TOGARAM2Q6ZUX3 1019 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 SPRED2Q7Z698 418 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 SLC2A14Q8TDB8 520 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 SYT11Q9BT88 431 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 MED10Q9BTT4 135 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 HERC2P3Q9BVR0 1158 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 PBX4Q9BYU1 374 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 ALG13Q9NP73 1137 aaKnown RBP13.75□□□□□ -0.21
CBWD3-203ENST00000377344 CRTAC1Q9NQ79 661 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 HESX1Q9UBX0 185 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 MSRAQ9UJ68 235 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 YBX2Q9Y2T7 364 aaKnown RBP13.75□□□□□ -0.21
CBWD3-203ENST00000377344 CEP83Q9Y592 693 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 VWA8A3KMH1 1905 aa13.75□□□□□ -0.21
CBWD3-203ENST00000377344 GBF1Q92538 1859 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 M0QYV0 167 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 O00370 1275 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 EFEMP2O95967 443 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 URODP06132 367 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 ANXA13P27216 316 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 PLCB3Q01970 1234 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 MLLT1Q03111 559 aaPredicted RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 STILQ15468 1287 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 CNGA2Q16280 664 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 PSMD5Q16401 504 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 SLC39A12Q504Y0 691 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 ACRBPQ8NEB7 543 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 MYCBPAPQ8TBZ2 947 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 PCDHB18PQ96TA0 734 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 STK39Q9UEW8 545 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 PYCARDQ9ULZ3 195 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 OR6C75A6NL08 312 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 CLDN5O00501 218 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 MICAL2O94851 1124 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 CPB1P15086 417 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 RPL17P18621 184 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 MRPL58Q14197 206 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 RAB30Q15771 203 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 DENND1BQ6P3S1 775 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 ALKBH5Q6P6C2 394 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 LCLAT1Q6UWP7 414 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 SLC30A5Q8TAD4 765 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 UBA3Q8TBC4 463 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 CPA5Q8WXQ8 436 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 AUTS2Q8WXX7 1259 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 PCED1BQ96HM7 432 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 TGS1Q96RS0 853 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 EIF3CQ99613 913 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 PLVAPQ9BX97 442 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 NKX2-4Q9H2Z4 354 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 MRPL17Q9NRX2 175 aaKnown RBP13.74□□□□□ -0.21
CBWD3-203ENST00000377344 CHST7Q9NS84 486 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 NAGPAQ9UK23 515 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 PCDHGC3Q9UN70 934 aa13.74□□□□□ -0.21
CBWD3-203ENST00000377344 NLRC5Q86WI3 1866 aa13.73□□□□□ -0.21
CBWD3-203ENST00000377344 KRT83P78385 493 aa13.73□□□□□ -0.21
CBWD3-203ENST00000377344 DSG1Q02413 1049 aa13.73□□□□□ -0.21
CBWD3-203ENST00000377344 MAPRE1Q15691 268 aaKnown RBP13.73□□□□□ -0.21
CBWD3-203ENST00000377344 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
CBWD3-203ENST00000377344 NAA35Q5VZE5 725 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms