RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 LAMA4Q16363 1823 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 ASB14A6NK59 587 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 STK10O94804 968 aaKnown RBP11.69□□□□□ -0.54
HDAC6-203ENST00000376619 ARIH2O95376 493 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 CPA2P48052 419 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 FKBP1CQ5VVH2 108 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 C4orf50Q6ZRC1 276 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 RNF135Q8IUD6 432 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 REPS2Q8NFH8 660 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 RXFP2Q8WXD0 754 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 SEC16BQ96JE7 1060 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 TRABDQ9H4I3 376 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 XPO7Q9UIA9 1087 aaKnown RBP11.69□□□□□ -0.54
HDAC6-203ENST00000376619 UPP2O95045 317 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 GZMAP12544 262 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 ACO1P21399 889 aaKnown RBP11.69□□□□□ -0.54
HDAC6-203ENST00000376619 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-203ENST00000376619 ARL4CP56559 192 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 CRADDP78560 199 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 TNFAIP2Q03169 654 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 MROH9Q5TGP6 573 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 TTC27Q6P3X3 843 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 MPZL3Q6UWV2 235 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 CFAP69A5D8W1 941 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 USP12O75317 370 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 PROSCO94903 275 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 FKBP1AP62942 108 aaKnown RBP11.69□□□□□ -0.54
HDAC6-203ENST00000376619 ABHD15Q6UXT9 468 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 BEST2Q8NFU1 509 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 EDEM1Q92611 657 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 ZNF516Q92618 1163 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 TRAIPQ9BWF2 469 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
HDAC6-203ENST00000376619 PCK1P35558 622 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TMPRSS15P98073 1019 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 ROR1Q01973 937 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 BMPR2Q13873 1038 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TAF5Q15542 800 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 KIRREL3Q8IZU9 778 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 JOSD2Q8TAC2 188 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 FAM193BQ96PV7 902 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 CGRRF1Q99675 332 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 APOBEC3GQ9HC16 384 aaKnown RBP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 E5RJQ4 531 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TROVE2P10155 538 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 RBP5P82980 135 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 EFCAB13Q8IY85 973 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 HELQQ8TDG4 1101 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TNS1Q9HBL0 1735 aaKnown RBP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 ETNK1Q9HBU6 452 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TSPAN16Q9UKR8 245 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 SMCHD1A6NHR9 2005 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 MYH15Q9Y2K3 1946 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 GOLGA8TH3BQL2 631 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 P4HA2O15460 535 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 B3GAT3O94766 335 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 POMCP01189 267 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 KRT7P08729 469 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 PECAM1P16284 738 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 NFIL3Q16649 462 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 ZACNQ401N2 412 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TMBIM4Q9HC24 238 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 GDF3Q9NR23 364 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 WNK3Q9BYP7 1800 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 ZMYM2Q9UBW7 1377 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 KCNK1O00180 336 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TBC1D12O60347 775 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 PGK1P00558 417 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 KRT4P19013 534 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 WNT7BP56706 349 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 PTPN11Q06124 597 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-203ENST00000376619 SURF1Q15526 300 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TXNRD3NBQ6F5E7 133 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 LRRC57Q8N9N7 239 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 BBOF1Q8ND07 529 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 TMC2Q8TDI7 906 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 DEPDC1BQ8WUY9 529 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 CYTH2Q99418 400 aa11.68□□□□□ -0.54
HDAC6-203ENST00000376619 CITO14578 2027 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 PLIN4Q96Q06 1357 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SPATA31C2B4DYI2 1134 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 MEFVO15553 781 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 AVILO75366 819 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 FARP2O94887 1054 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 CCDC130P13994 396 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 CHRNB2P17787 502 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 RFC5P40937 340 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 BMT2Q1RMZ1 405 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 HEATR6Q6AI08 1181 aaKnown RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SCARA3Q6AZY7 606 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 TEPSINQ96N21 525 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 C17orf75Q9HAS0 396 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms